RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 BTLAQ7Z6A9 289 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ELOA2Q8IYF1 753 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 KRT35Q92764 455 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ITFG2Q969R8 447 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF396Q96N95 335 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 DNAI2Q9GZS0 605 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 TAOK3Q9H2K8 898 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 AGTPBP1Q9UPW5 1226 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 COL4A1P02462 1669 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ADAMTS3O15072 1205 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 IRAK2O43187 625 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 SGTAO43765 313 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 SOCS5O75159 536 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 KRT13P13646 458 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 TARSP26639 723 aaKnown RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ABCD1P33897 745 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 TPD52P55327 224 aaPredicted RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 INPP5AQ14642 412 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF423Q2M1K9 1284 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 CCDC152Q4G0S7 254 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 SASS6Q6UVJ0 657 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 RBM43Q6ZSC3 357 aaKnown RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 MVB12AQ96EY5 273 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 MYL10Q9BUA6 226 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ANKRD2Q9GZV1 360 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 ZMAT3Q9HA38 289 aaKnown RBP11.51□□□□□ -0.57
UBFD1-205ENST00000566136 TIAM2Q8IVF5 1701 aa11.51□□□□□ -0.57
UBFD1-205ENST00000566136 WTIPA6NIX2 430 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 THAP12O43422 761 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 PRKAB2O43741 272 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 TUBB4AP04350 444 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 IGHMBP2P38935 993 aaKnown RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ALDH9A1P49189 494 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ARSDP51689 593 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 SGCGQ13326 291 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 CIAPIN1Q6FI81 312 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 MICU3Q86XE3 530 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 FSIP1Q8NA03 581 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 PTPRN2Q92932 1015 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 NOL6Q9H6R4 1146 aaKnown RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 KCND1Q9NSA2 647 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ANGEL1Q9UNK9 670 aaKnown RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 CLIC4Q9Y696 253 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 TACC3Q9Y6A5 838 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ZFP37Q9Y6Q3 630 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 C2orf81A6NN90 581 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 KIF28PB7ZC32 967 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ARHGAP6O43182 974 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 FSBPO95073 299 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ATP5F1P24539 256 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 KPNA1P52294 538 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 EFR3AQ14156 821 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 RPS26P11Q5JNZ5 115 aaPredicted RBP11.5□□□□□ -0.57
UBFD1-205ENST00000566136 PGBD2Q6P3X8 592 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 IL27RAQ6UWB1 636 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF783Q6ZMS7 281 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 TMEM192Q8IY95 271 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 KRT78Q8N1N4 520 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 MIGA1Q8NAN2 632 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 NSMCE4AQ9NXX6 385 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 ARAP2Q8WZ64 1704 aa11.5□□□□□ -0.57
UBFD1-205ENST00000566136 TNRC6CQ9HCJ0 1690 aaKnown RBP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 SASH3O75995 380 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 CPT1AP50416 773 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 METAP2P50579 478 aaKnown RBP eCLIP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 CHRNDQ07001 517 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 SLC35G1Q2M3R5 365 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 PGS1Q32NB8 556 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 WDR44Q5JSH3 913 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 DENND5AQ6IQ26 1287 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 RAPH1Q70E73 1250 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 C7orf31Q8N865 590 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 RNF152Q8N8N0 203 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 FBXO18Q8NFZ0 1043 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 OR10H5Q8NGA6 315 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 TRAPPC12Q8WVT3 735 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 PHKBQ93100 1093 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 NAPBQ9H115 298 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 SUDS3Q9H7L9 328 aaPredicted RBP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 PCDHA7Q9UN72 937 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 AP3D1O14617 1153 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 FGF18O76093 207 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 GUCY1A3Q02108 690 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 MUM1L1Q5H9M0 696 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
UBFD1-205ENST00000566136 NFXL1Q6ZNB6 911 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 ZNF606Q8WXB4 792 aa11.49□□□□□ -0.57
UBFD1-205ENST00000566136 SLC6A18Q96N87 628 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms