RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 LOC730098B7Z3J9 87 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 PDXKO00764 312 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 PPEF2O14830 753 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 CLIC2O15247 247 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 OAZ2O95190 189 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 TYMPP19971 482 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 SSTR3P32745 418 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-212ENST00000565517 TFAMQ00059 246 aaKnown RBP16.68■□□□□ 0.26
COMMD4-212ENST00000565517 SNRNP35Q16560 246 aaKnown RBP16.68■□□□□ 0.26
COMMD4-212ENST00000565517 UVSSAQ2YD98 709 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 ZNF280DQ6N043 979 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 RSPO2Q6UXX9 243 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-212ENST00000565517 DSTYKQ6XUX3 929 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 SLC9A9Q8IVB4 645 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 ELOA2Q8IYF1 753 aaPredicted RBP16.68■□□□□ 0.26
COMMD4-212ENST00000565517 ZNF461Q8TAF7 563 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 NOC3LQ8WTT2 800 aaKnown RBP16.68■□□□□ 0.26
COMMD4-212ENST00000565517 KCTD10Q9H3F6 313 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 PDE11AQ9HCR9 933 aa16.68■□□□□ 0.26
COMMD4-212ENST00000565517 ZMYND10O75800 440 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 ABLIM3O94929 683 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 HOXA9P31269 272 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 PNPLA4P41247 253 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 TAF6P49848 677 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 CYP2J2P51589 502 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 YWHAHQ04917 246 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-212ENST00000565517 MYBPC2Q14324 1141 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 CTXN3Q4LDR2 81 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 ZNF560Q96MR9 790 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 POMKQ9H5K3 350 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 INTS13Q9NVM9 706 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 DMAC2Q9NW81 257 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 HOOK1Q9UJC3 728 aaKnown RBP16.67■□□□□ 0.26
COMMD4-212ENST00000565517 FBXL5Q9UKA1 691 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 ITGA11Q9UKX5 1188 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 DSEQ9UL01 958 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 MAFFQ9ULX9 164 aa16.67■□□□□ 0.26
COMMD4-212ENST00000565517 SPTLC1O15269 473 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 PRPF40AO75400 957 aaKnown RBP16.66■□□□□ 0.26
COMMD4-212ENST00000565517 CYP11A1P05108 521 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 HNRNPA1P09651 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
COMMD4-212ENST00000565517 ODC1P11926 461 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 ROR1Q01973 937 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 PSMD6Q15008 389 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 DUOXA2Q1HG44 320 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 SV2CQ496J9 727 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 TPGS2Q68CL5 300 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 USP37Q86T82 979 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
COMMD4-212ENST00000565517 LRRC52Q8N7C0 313 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 C1orf127Q8N9H9 656 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 CXorf38Q8TB03 319 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 SPATA20Q8TB22 786 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 BORCS6Q96GS4 357 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 ANKRD36BP1Q96IX9 119 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 MFSD14AQ96MC6 490 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 GSDMAQ96QA5 445 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 PRKD2Q9BZL6 878 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 RMND1Q9NWS8 449 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 CDH22Q9UJ99 828 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 TRAF3IP3Q9Y228 551 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 USTQ9Y2C2 406 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 TSC2P49815 1807 aa16.66■□□□□ 0.26
COMMD4-212ENST00000565517 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 WDR27A2RRH5 827 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 KPNA7A9QM74 516 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 EXOC3O60645 756 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 RFPL2O75678 378 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 SMC2O95347 1197 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 ITGB3P05106 788 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 POU2F2P09086 479 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 WEE2P0C1S8 567 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 TMEM191BP0C7N4 346 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 ATF2P15336 505 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 RBP5P82980 135 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 CYP24A1Q07973 514 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 PNOCQ13519 176 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 NFIL3Q16649 462 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 OVOS1Q6IE37 1185 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 CCDC149Q6ZUS6 474 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 RDH13Q8NBN7 331 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-212ENST00000565517 FNBP1Q96RU3 617 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 GTPBP4Q9BZE4 634 aaKnown RBP16.65■□□□□ 0.26
COMMD4-212ENST00000565517 MYO10Q9HD67 2058 aa16.65■□□□□ 0.26
COMMD4-212ENST00000565517 OR6C75A6NL08 312 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 CYB561D2O14569 222 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
COMMD4-212ENST00000565517 TNNC2P02585 160 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 C8AP07357 584 aa16.64■□□□□ 0.25
COMMD4-212ENST00000565517 POLR2BP30876 1174 aaKnown RBP16.64■□□□□ 0.25
COMMD4-212ENST00000565517 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms