RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SLC17A7Q9P2U7 560 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GYG2O15488 501 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CETN2P41208 172 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SKIV2L2P42285 1042 aaKnown RBP21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 RASSF2P50749 326 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 RAB27AP51159 221 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 HAUS6Q7Z4H7 955 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ATP8B3O60423 1300 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SMAPO00193 183 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SERPINB3P29508 390 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SP4Q02446 784 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MTMR2Q13614 643 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ACVR2BQ13705 512 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CLNKQ7Z7G1 428 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 HOMER2Q9NSB8 354 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TBX10O75333 385 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CCNG1P51959 295 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MRPS35P82673 323 aaKnown RBP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 C4orf50Q6ZRC1 276 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CCDC89Q8N998 374 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 RBBP8NLQ8NC74 664 aaPredicted RBP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GRK7Q8WTQ7 553 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PTPRN2Q92932 1015 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MKL1Q969V6 931 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 DDX27Q96GQ7 796 aaKnown RBP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ETAA1Q9NY74 926 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PRR12Q9ULL5 1215 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FOSP01100 380 aaPredicted RBP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PTPN4P29074 926 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 LRRC36Q1X8D7 754 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MOXD1Q6UVY6 613 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TEX9Q8N6V9 391 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 LARSQ9P2J5 1176 aaKnown RBP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 UVRAGQ9P2Y5 699 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 LGALS13Q9UHV8 139 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 LAMB2P55268 1798 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CDK5RAP2Q96SN8 1893 aa21.68■■□□□ 1.06
MAP1LC3B-206ENST00000564844 KCNA3P22001 575 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 NRLP54845 237 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SNRNP35Q16560 246 aaKnown RBP21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FAM102BQ5T8I3 360 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TMEM121Q9BTD3 319 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 THOC5Q13769 683 aaKnown RBP21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PDK4Q16654 411 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PLA2G4FQ68DD2 849 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 APOBEC3HQ6NTF7 200 aaKnown RBP21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SLC25A41Q8N5S1 370 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 DENND1AQ8TEH3 1009 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ZNF526Q8TF50 670 aaPredicted RBP21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SHC3Q92529 594 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CLPTM1LQ96KA5 538 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CFAP57Q96MR6 1250 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CDCA7Q9BWT1 371 aaPredicted RBP21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TUFT1Q9NNX1 390 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PLIN4Q96Q06 1357 aa21.67■■□□□ 1.06
MAP1LC3B-206ENST00000564844 IPO5O00410 1097 aaKnown RBP21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TFDP1Q14186 410 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FOXB2Q5VYV0 432 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PDCD7Q8N8D1 485 aaKnown RBP21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TCP10LQ8TDR4 215 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TTC17Q96AE7 1141 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ZNF333Q96JL9 665 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 NT5C1BQ96P26 610 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TRIM4Q9C037 500 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 DCLRE1BQ9H816 532 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 WFS1O76024 890 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 BAG2O95816 211 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FESP07332 822 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SERPINB4P48594 390 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 NEK3P51956 506 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CCDC15Q0P6D6 951 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 NR1H3Q13133 447 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 RINLQ6ZS11 566 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 HELQQ8TDG4 1101 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GRIN3BO60391 1043 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SLC15A2Q16348 729 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 KANSL3Q9P2N6 904 aa21.66■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SPATA31A5Q5VU36 1347 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SPATA31A7Q8IWB4 1347 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 LIN7AO14910 233 aaPredicted RBP21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ATP5HO75947 161 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ETS2P15036 469 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FYB2Q5VWT5 728 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MCOLN2Q8IZK6 566 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FBXO27Q8NI29 283 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ACCSQ96QU6 501 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 TTC1Q99614 292 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 STOML1Q9UBI4 398 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 KITP10721 976 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 AMPD1P23109 780 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CIITAP33076 1130 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CACNA2D1P54289 1103 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CEP55Q53EZ4 464 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CWF19L1Q69YN2 538 aaKnown RBP21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 DDX1Q92499 740 aaKnown RBP21.65■■□□□ 1.06
MAP1LC3B-206ENST00000564844 INPP5DQ92835 1189 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms