RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CLSTN1O94985 981 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 ODC1P11926 461 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 TKTP29401 623 aaKnown RBP17.22■□□□□ 0.35
RAB40C-208ENST00000564703 GTF2F1P35269 517 aaKnown RBP eCLIP17.22■□□□□ 0.35
RAB40C-208ENST00000564703 NDUFV1P49821 464 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 ENPEPQ07075 957 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 TPD52L1Q16890 204 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-208ENST00000564703 AAK1Q2M2I8 961 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 RTP2Q5QGT7 225 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 FOXR2Q6PJQ5 311 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 PRSS55Q6UWB4 352 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-208ENST00000564703 FILIP1Q7Z7B0 1213 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 LRRC52Q8N7C0 313 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 LNX1Q8TBB1 728 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-208ENST00000564703 SENP8Q96LD8 212 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 METTL14Q9HCE5 456 aaKnown RBP17.22■□□□□ 0.35
RAB40C-208ENST00000564703 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 DSEQ9UL01 958 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 SZT2Q5T011 3432 aa17.22■□□□□ 0.35
RAB40C-208ENST00000564703 SPDYE4A6NLX3 237 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 LRRIQ3A6PVS8 624 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 PPEF2O14830 753 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 SLC16A3O15427 465 aaKnown RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 TEX28O15482 410 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 HUS1O60921 280 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 CLDN10P78369 228 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 YWHAHQ04917 246 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 BFSP1Q12934 665 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 CTXN3Q4LDR2 81 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 VARS2Q5ST30 1063 aaKnown RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 LLGL2Q6P1M3 1020 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 PALB2Q86YC2 1186 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 GLYCTKQ8IVS8 523 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 ZNF516Q92618 1163 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 CASP10Q92851 521 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 HPDLQ96IR7 371 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 SRRTQ9BXP5 876 aaKnown RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 OXCT2Q9BYC2 517 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-208ENST00000564703 BACE2Q9Y5Z0 518 aa17.21■□□□□ 0.35
RAB40C-208ENST00000564703 GNA14O95837 355 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 RPL17P18621 184 aaKnown RBP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 TYMPP19971 482 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 AARSP49588 968 aaKnown RBP eCLIP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 DLG4P78352 724 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 CT47A1Q5JQC4 288 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 TCERG1LQ5VWI1 586 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 TTI2Q6NXR4 508 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 CREBRFQ8IUR6 639 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 THEM5Q8N1Q8 247 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 DUSP9Q99956 384 aaKnown RBP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 UBE2ZQ9H832 354 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 SIX4Q9UIU6 781 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 TIMM13Q9Y5L4 95 aaPredicted RBP17.2■□□□□ 0.34
RAB40C-208ENST00000564703 TRANK1O15050 2925 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 PTPRJQ12913 1337 aa17.2■□□□□ 0.34
RAB40C-208ENST00000564703 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-208ENST00000564703 SPTLC1O15269 473 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 LETM1O95202 739 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-208ENST00000564703 GLUD1P00367 558 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 C1RP00736 705 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 KCNA5P22460 613 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 ERCC5P28715 1186 aaPredicted RBP17.19■□□□□ 0.34
RAB40C-208ENST00000564703 ATICP31939 592 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 GTF2H1P32780 548 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 OR1D2P34982 312 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 ARPP19P56211 112 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 CTC1Q2NKJ3 1217 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 OVOS1Q6IE37 1185 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 ZNF280DQ6N043 979 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
RAB40C-208ENST00000564703 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 PLEKHO2Q8TD55 490 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 FAM84AQ96KN4 292 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 MMS19Q96T76 1030 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 MMRN2Q9H8L6 949 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 ANO10Q9NW15 660 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 THEGQ9P2T0 379 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 MTRRQ9UBK8 725 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 SNX9Q9Y5X1 595 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
RAB40C-208ENST00000564703 SCN1AP35498 2009 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 LINC01565O15544 149 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 OAZ2O95190 189 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 C4BPAP04003 597 aaKnown RBP17.18■□□□□ 0.34
RAB40C-208ENST00000564703 CCDC192P0DO97 292 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 NCOA4Q13772 614 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 MRPL58Q14197 206 aaKnown RBP17.18■□□□□ 0.34
RAB40C-208ENST00000564703 SGSM1Q2NKQ1 1148 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 DPCR1Q3MIW9 517 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 WDR72Q3MJ13 1102 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 DCAF17Q5H9S7 520 aaPredicted RBP17.18■□□□□ 0.34
RAB40C-208ENST00000564703 TMEM184AQ6ZMB5 413 aa17.18■□□□□ 0.34
RAB40C-208ENST00000564703 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
RAB40C-208ENST00000564703 SV2AQ7L0J3 742 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms