RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 KREMEN2Q8NCW0 462 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 ENGASEQ8NFI3 743 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 SUSD6Q92537 303 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 RIPOR3Q96MK2 946 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 POP1Q99575 1024 aaKnown RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 PHF7Q9BWX1 381 aaPredicted RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 PLEKHA4Q9H4M7 779 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 PDE11AQ9HCR9 933 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 MTRRQ9UBK8 725 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 HOOK1Q9UJC3 728 aaKnown RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 R3HCC1Q9Y3T6 440 aaKnown RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 TIMM13Q9Y5L4 95 aaPredicted RBP10.75□□□□□ -0.69
CDH1-206ENST00000564676 CDY1Q9Y6F8 540 aa10.75□□□□□ -0.69
CDH1-206ENST00000564676 MTCL1Q9Y4B5 1905 aaKnown RBP10.74□□□□□ -0.69
CDH1-206ENST00000564676 SCN1AP35498 2009 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 CCDC195A0A1B0GUA6 201 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 ANO9A1A5B4 782 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 ARHGEF37A1IGU5 675 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 M0QZQ0 153 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 CALUO43852 315 aaPredicted RBP10.74□□□□□ -0.69
CDH1-206ENST00000564676 EXOC3O60645 756 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 KINO60870 393 aaKnown RBP10.74□□□□□ -0.69
CDH1-206ENST00000564676 GADD45BO75293 160 aaPredicted RBP10.74□□□□□ -0.69
CDH1-206ENST00000564676 SMC2O95347 1197 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 C1RP00736 705 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 TMEM191BP0C7N4 346 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 PAX3P23760 479 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 TAF6P49848 677 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 LILRA4P59901 499 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 YWHAHQ04917 246 aaPredicted RBP10.74□□□□□ -0.69
CDH1-206ENST00000564676 ZP2Q05996 745 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 PNOCQ13519 176 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 RAB33AQ14088 237 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 SNRNP35Q16560 246 aaKnown RBP10.74□□□□□ -0.69
CDH1-206ENST00000564676 LIN9Q5TKA1 542 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 ZNF280DQ6N043 979 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 LILRA6Q6PI73 481 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 C12orf56Q8IXR9 622 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 CSGALNACT2Q8N6G5 542 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 CCDC127Q96BQ5 260 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 ANKRD36BP1Q96IX9 119 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 RPGRIP1Q96KN7 1286 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 SENP8Q96LD8 212 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 ZNF560Q96MR9 790 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 TIGD1Q96MW7 591 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 FNBP1Q96RU3 617 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 PIDD1Q9HB75 910 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 RMND1Q9NWS8 449 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 CDH22Q9UJ99 828 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 FBXL5Q9UKA1 691 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 AGAP1Q9UPQ3 857 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 MAPK8IP1Q9UQF2 711 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 TTC28Q96AY4 2481 aa10.74□□□□□ -0.69
CDH1-206ENST00000564676 PDXKO00764 312 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 CYB561D2O14569 222 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 RFPL2O75678 378 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 TNNC2P02585 160 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 ITGB3P05106 788 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 KRT19P08727 400 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 DLATP10515 647 aaKnown RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 ODC1P11926 461 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 TNNI1P19237 187 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 TYMPP19971 482 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 POLR2BP30876 1174 aaKnown RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 ELF1P32519 619 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 AARSP49588 968 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDH1-206ENST00000564676 RBP5P82980 135 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 CYP24A1Q07973 514 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 MRPL58Q14197 206 aaKnown RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 DUOXA2Q1HG44 320 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 SV2CQ496J9 727 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 PPM1LQ5SGD2 360 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 LMBRD2Q68DH5 695 aaPredicted RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 RSPO2Q6UXX9 243 aaPredicted RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 GPR149Q86SP6 731 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 CMASQ8NFW8 434 aaPredicted RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 SMG7Q92540 1137 aaKnown RBP10.73□□□□□ -0.69
CDH1-206ENST00000564676 SMARCE1Q969G3 411 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 MTMR12Q9C0I1 747 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 CD320Q9NPF0 282 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 INTS13Q9NVM9 706 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 FBXW11Q9UKB1 542 aa10.73□□□□□ -0.69
CDH1-206ENST00000564676 KPNA7A9QM74 516 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 SPTLC1O15269 473 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 TBC1D4O60343 1298 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 PRPF40AO75400 957 aaKnown RBP10.72□□□□□ -0.69
CDH1-206ENST00000564676 ZMYND10O75800 440 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 OAZ2O95190 189 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 NR3C1P04150 777 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 C8AP07357 584 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 SP100P23497 879 aaPredicted RBP10.72□□□□□ -0.69
CDH1-206ENST00000564676 PNPLA4P41247 253 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 ROR1Q01973 937 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 BFSP1Q12934 665 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 PSMD6Q15008 389 aa10.72□□□□□ -0.69
CDH1-206ENST00000564676 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms