RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 HABP2Q14520 560 aaPredicted RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ZFYVE27Q5T4F4 411 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 DRICH1Q6PGQ1 229 aaPredicted RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ZNF783Q6ZMS7 281 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 TOGARAM2Q6ZUX3 1019 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 PDSS2Q86YH6 399 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 OR52N2Q8NGI0 321 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 TBC1D15Q8TC07 691 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 MIEF2Q96C03 454 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 PHACTR3Q96KR7 559 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 CHMP4AQ9BY43 222 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 TRIM54Q9BYV2 358 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 SACM1LQ9NTJ5 587 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 FNIP2Q9P278 1114 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 MED16Q9Y2X0 877 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 DRGXA6NNA5 263 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ZNF785A8K8V0 405 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 FOXN3O00409 490 aaPredicted RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 BTN3A1O00481 513 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 PRICKLE3O43900 615 aaPredicted RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 TBC1D4O60343 1298 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 AGFG2O95081 481 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ITGB1P05556 798 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 NFIXQ14938 502 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 METTL24Q5JXM2 366 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 C10orf62Q5T681 223 aaPredicted RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 MED25Q71SY5 747 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 POLNQ7Z5Q5 900 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 DPP9Q86TI2 863 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 SESTD1Q86VW0 696 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 SGMS1Q86VZ5 419 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ANKRD35Q8N283 1001 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 OR10H5Q8NGA6 315 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ATXN2LQ8WWM7 1075 aaKnown RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 RIPOR3Q96MK2 946 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 UNKQ9C0B0 810 aaKnown RBP5.76□□□□□ -1.49
LINC00560-201ENST00000564593 MYH16Q9H6N6 1097 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 PNPLA8Q9NP80 782 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 STK32BQ9NY57 414 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 SRRDQ9UH36 339 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 DMTF1Q9Y222 760 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 PLEKHD1A6NEE1 506 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 RASA4BC9J798 803 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 RASA4O43374 803 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 LONRF3Q496Y0 759 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 C3orf38Q5JPI3 329 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 GORABQ5T7V8 394 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 SKAP1Q86WV1 359 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 SLC17A8Q8NDX2 589 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 ARPC5LQ9BPX5 153 aa5.75□□□□□ -1.49
LINC00560-201ENST00000564593 AFF4Q9UHB7 1163 aaKnown RBP5.75□□□□□ -1.49
LINC00560-201ENST00000564593 POM121BA6NF01 834 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 CAPN14A8MX76 684 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 ABHD16AO95870 558 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 STT3AP46977 705 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 ZNF135P52742 658 aaPredicted RBP5.74□□□□□ -1.49
LINC00560-201ENST00000564593 CHN2P52757 468 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 SLC13A2Q13183 592 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 DCAF17Q5H9S7 520 aaPredicted RBP5.74□□□□□ -1.49
LINC00560-201ENST00000564593 SPTY2D1Q68D10 685 aaPredicted RBP5.74□□□□□ -1.49
LINC00560-201ENST00000564593 XRRA1Q6P2D8 792 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 C1orf228Q6PIY5 440 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 USP37Q86T82 979 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 EXOC8Q8IYI6 725 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 TMIEQ8NEW7 156 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 DDX17Q92841 729 aaKnown RBP5.74□□□□□ -1.49
LINC00560-201ENST00000564593 SCAMP4Q969E2 229 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 SGCZQ96LD1 299 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 DPH1Q9BZG8 443 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 IMPG2Q9BZV3 1241 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 GPR35Q9HC97 309 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 PLCB1Q9NQ66 1216 aa5.74□□□□□ -1.49
LINC00560-201ENST00000564593 EIF3JO75822 258 aaKnown RBP5.73□□□□□ -1.49
LINC00560-201ENST00000564593 UNC5CO95185 931 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 IL18RAPO95256 599 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 THP07101 528 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 SETSIPP0DME0 302 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 COMTP21964 271 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 TNFSF4P23510 183 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 MXRA7P84157 204 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 DAG1Q14118 895 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 CRB2Q5IJ48 1285 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 GGNQ86UU5 652 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 LIX1LQ8IVB5 337 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 CCDC33Q8N5R6 958 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 OR2C3Q8N628 320 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 CXorf38Q8TB03 319 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 DEPTORQ8TB45 409 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 NMD3Q96D46 503 aaKnown RBP5.73□□□□□ -1.49
LINC00560-201ENST00000564593 MSLNLQ96KJ4 702 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 TEPSINQ96N21 525 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 KLHL32Q96NJ5 620 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 SSBP3Q9BWW4 388 aaPredicted RBP5.73□□□□□ -1.49
LINC00560-201ENST00000564593 SMURF2Q9HAU4 748 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 STARD7Q9NQZ5 370 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 COL20A1Q9P218 1284 aa5.73□□□□□ -1.49
LINC00560-201ENST00000564593 PATE3B3GLJ2 98 aa5.72□□□□□ -1.49
LINC00560-201ENST00000564593 F8W8V4 182 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms