RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 FLOT1O75955 427 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 SNUPNO95149 360 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 SYF2O95926 243 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 FESP07332 822 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 MMEP08473 750 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 ZBTB48P10074 688 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 FERP16591 822 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 FNTAP49354 379 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 FNTBP49356 437 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 MLLT6P55198 1093 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 XRCC4Q13426 336 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 OS9Q13438 667 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 BIRC3Q13489 604 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 BIRC2Q13490 618 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 SLC39A14Q15043 492 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 SEC23AQ15436 765 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 ZNF569Q5MCW4 686 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 SPDYCQ5MJ68 293 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 CFAP58Q5T655 872 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 PAPD7Q5XG87 772 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 TMED8Q6PL24 325 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 SLC4A10Q6U841 1118 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 LRIG3Q6UXM1 1119 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 ZNF572Q7Z3I7 529 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 TMEM139Q8IV31 216 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 RPUSD2Q8IZ73 545 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 MMGT1Q8N4V1 131 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 PDILTQ8N807 584 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 TXNDC5Q8NBS9 432 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 CAGE1Q8TC20 777 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 CALML6Q8TD86 181 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 ZFAND2BQ8WV99 257 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 CAVIN3Q969G5 261 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 PPP1R14BQ96C90 147 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 FAXDC2Q96IV6 333 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 SPAG5Q96R06 1193 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 WDR24Q96S15 920 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 NUP58Q9BVL2 599 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 TARS2Q9BW92 718 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 CNOT10Q9H9A5 744 aaKnown RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 GALNT8Q9NY28 637 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 CORO1CQ9ULV4 474 aaPredicted RBP6.11□□□□□ -1.43
CHD9-210ENST00000564582 PCDHA7Q9UN72 937 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 TSPOAP1O95153 1857 aa6.11□□□□□ -1.43
CHD9-210ENST00000564582 ABCC3O15438 1527 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 TULP4Q9NRJ4 1543 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 ADCY9O60503 1353 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 MROH6A6NGR9 719 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 RTN2O75298 545 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 CYP17A1P05093 508 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 TCP1P17987 556 aaKnown RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 KIF5BP33176 963 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 GCKP35557 465 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 CYLC1P35663 651 aaPredicted RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 PPP1R2P41236 205 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 PAFAH1B1P43034 410 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 MAGEA8P43361 318 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 NAP1L1P55209 391 aaKnown RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 VSNL1P62760 191 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 GNGT1P63211 74 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 OCRLQ01968 901 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 RTP5Q14D33 572 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 ZRSR2Q15696 482 aaKnown RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 CMPK2Q5EBM0 449 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 SH2D4BQ5SQS7 431 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 CXXC5Q7LFL8 322 aaKnown RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 APBB1IPQ7Z5R6 666 aaPredicted RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 FRMD5Q7Z6J6 570 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 SESTD1Q86VW0 696 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 NME9Q86XW9 330 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 PASD1Q8IV76 773 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 IFT20Q8IY31 132 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 ARHGAP18Q8N392 663 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 MREGQ8N565 214 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 KIAA1958Q8N8K9 716 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 TC2NQ8N9U0 490 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 SYT8Q8NBV8 401 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 TRIM58Q8NG06 486 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 ZCCHC14Q8WYQ9 949 aaKnown RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 PHACTR3Q96KR7 559 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 IFT74Q96LB3 600 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 CCDC28BQ9BUN5 200 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.1□□□□□ -1.43
CHD9-210ENST00000564582 CHCHD3Q9NX63 227 aaKnown RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 BTBD7Q9P203 1132 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 TSPYL4Q9UJ04 414 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 ANAPC4Q9UJX5 808 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 MAPRE3Q9UPY8 281 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 PPLO60437 1756 aa6.1□□□□□ -1.43
CHD9-210ENST00000564582 CEP170BQ9Y4F5 1589 aaPredicted RBP6.1□□□□□ -1.43
CHD9-210ENST00000564582 DLC1Q96QB1 1528 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 CRYBG1Q9Y4K1 1723 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 PRAMEF22A3QJZ6 481 aa6.09□□□□□ -1.43
CHD9-210ENST00000564582 MGRN1O60291 552 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms