RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 WDR27A2RRH5 827 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 PIRO00625 290 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 SYKP43405 635 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 NDUFA8P51970 172 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 ZXDAP98168 799 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 TFAMQ00059 246 aaKnown RBP33.27■■■□□ 2.92
CMTM4-204ENST00000563952 YWHAHQ04917 246 aaPredicted RBP33.27■■■□□ 2.92
CMTM4-204ENST00000563952 USP37Q86T82 979 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 ZNF461Q8TAF7 563 aa33.27■■■□□ 2.92
CMTM4-204ENST00000563952 ANO9A1A5B4 782 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 SPTLC1O15269 473 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 GBP2P32456 591 aaPredicted RBP33.26■■■□□ 2.91
CMTM4-204ENST00000563952 NUCB2P80303 420 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 UVSSAQ2YD98 709 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 NT5DC4Q86YG4 428 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 FSIP1Q8NA03 581 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 SCFD1Q8WVM8 642 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 UBE4BO95155 1302 aa33.26■■■□□ 2.91
CMTM4-204ENST00000563952 KIAA0391O15091 583 aaKnown RBP33.25■■■□□ 2.91
CMTM4-204ENST00000563952 XYLBO75191 536 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 ASGR2P07307 311 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 HOXA9P31269 272 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 ELF1P32519 619 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 GRASPQ7Z6J2 395 aaPredicted RBP33.25■■■□□ 2.91
CMTM4-204ENST00000563952 SENP8Q96LD8 212 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 EXOC1Q9NV70 894 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 HSPBP1Q9NZL4 362 aa33.25■■■□□ 2.91
CMTM4-204ENST00000563952 A0A1W2PQ27 194 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 A0A1W2PQ64 194 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 A0A1W2PQD8 194 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 PRRG1O14668 218 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 KLRC4O43908 158 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 N4BP1O75113 896 aaKnown RBP33.24■■■□□ 2.91
CMTM4-204ENST00000563952 ABLIM3O94929 683 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 ODC1P11926 461 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 CPB1P15086 417 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 PDE11AQ9HCR9 933 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 SCN1AP35498 2009 aa33.24■■■□□ 2.91
CMTM4-204ENST00000563952 FAM237AA0A1B0GTK4 181 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 PRR33A8MZF0 331 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 TGFB1I1O43294 461 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 OAZ2O95190 189 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 PAX3P23760 479 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 GET4Q7L5D6 327 aaPredicted RBP33.23■■■□□ 2.91
CMTM4-204ENST00000563952 GOLPH3LQ9H4A5 285 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 CYP4F11Q9HBI6 524 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 AGPAT3Q9NRZ7 376 aa33.23■■■□□ 2.91
CMTM4-204ENST00000563952 ATF2P15336 505 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 TYMPP19971 482 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 COL9A1P20849 921 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 TAF6P49848 677 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 NTHL1P78549 312 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 KMT5BQ4FZB7 885 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 OVOS1Q6IE37 1185 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 CBWD2Q8IUF1 395 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 CACTINQ8WUQ7 758 aaKnown RBP33.22■■■□□ 2.91
CMTM4-204ENST00000563952 FAM84AQ96KN4 292 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 SORCS3Q9UPU3 1222 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 MYO10Q9HD67 2058 aa33.22■■■□□ 2.91
CMTM4-204ENST00000563952 ZNF233A6NK53 670 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 CLIC2O15247 247 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 FSHRP23945 695 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 CYP2J2P51589 502 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 TPGS2Q68CL5 300 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 TRIM67Q6ZTA4 783 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 RTL10Q7L3V2 364 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 HS2ST1Q7LGA3 356 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 MYADMQ96S97 322 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 DOCK6Q96HP0 2047 aa33.21■■■□□ 2.91
CMTM4-204ENST00000563952 SEC24AO95486 1093 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 OR4Q2P0C623 313 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 POLR2BP30876 1174 aaKnown RBP33.2■■■□□ 2.91
CMTM4-204ENST00000563952 ADCY1Q08828 1119 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 MTMR3Q13615 1198 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 BMT2Q1RMZ1 405 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 OXCT2Q9BYC2 517 aaPredicted RBP33.2■■■□□ 2.91
CMTM4-204ENST00000563952 HCFC1R1Q9NWW0 138 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 TSC2P49815 1807 aa33.2■■■□□ 2.91
CMTM4-204ENST00000563952 ARHGEF37A1IGU5 675 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 CYB561D2O14569 222 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 LRG1P02750 347 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 ITGB3P05106 788 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 MYL1P05976 194 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 STK4Q13043 487 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 LMBRD2Q68DH5 695 aaPredicted RBP33.19■■■□□ 2.9
CMTM4-204ENST00000563952 RNF19BQ6ZMZ0 732 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 TCEAL8Q8IYN2 117 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 C1orf127Q8N9H9 656 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 RDH13Q8NBN7 331 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 ZNF560Q96MR9 790 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 SMOC2Q9H3U7 446 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 KIAA1586Q9HCI6 787 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP33.19■■■□□ 2.9
CMTM4-204ENST00000563952 AFF4Q9UHB7 1163 aaKnown RBP33.19■■■□□ 2.9
CMTM4-204ENST00000563952 AGAP1Q9UPQ3 857 aa33.19■■■□□ 2.9
CMTM4-204ENST00000563952 TMEM221A6NGB7 291 aa33.18■■■□□ 2.9
CMTM4-204ENST00000563952 OR6C75A6NL08 312 aa33.18■■■□□ 2.9
CMTM4-204ENST00000563952 M0R296 226 aa33.18■■■□□ 2.9
CMTM4-204ENST00000563952 POU2F2P09086 479 aa33.18■■■□□ 2.9
CMTM4-204ENST00000563952 TMEM191BP0C7N4 346 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms