RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 ADH1AP07327 375 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TYMPP19971 482 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 KCNA5P22460 613 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 CCNE1P24864 410 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 POLR2BP30876 1174 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 MCM4P33991 863 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 PPP1R2P41236 205 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 PNPLA4P41247 253 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 NDUFV1P49821 464 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TAF6P49848 677 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TFAMQ00059 246 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TFF2Q03403 129 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 LRRC63Q05C16 580 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 PSMD5Q16401 504 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 CAMK4Q16566 473 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 DUOXA2Q1HG44 320 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 LMBRD2Q68DH5 695 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 ANKRD40Q6AI12 368 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 KIAA1841Q6NSI8 718 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TTI2Q6NXR4 508 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 PDXDC1Q6P996 788 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 SYCE2Q6PIF2 218 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 PRSS55Q6UWB4 352 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 RBM43Q6ZSC3 357 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 ANKS3Q6ZW76 656 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 LIMS2Q7Z4I7 341 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 PPFIBP1Q86W92 1011 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 RDH13Q8NBN7 331 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TMC2Q8TDI7 906 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 ZNF516Q92618 1163 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 DHTKD1Q96HY7 919 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 IGFLR1Q9H665 355 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 TRIM49BA6NDI0 452 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 H3BQ06 376 aaPredicted RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 BIN1O00499 593 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 PSMA7O14818 248 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 SLC16A3O15427 465 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 C4BPAP04003 597 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 TMEM191BP0C7N4 346 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 EPCAMP16422 314 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 RPL13P26373 211 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 KLRC2P26717 231 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 DLG4P78352 724 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 FKBP3Q00688 224 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 ADAM9Q13443 819 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 RAB33AQ14088 237 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 ISM2Q6H9L7 571 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 ANKRD54Q6NXT1 300 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 C15orf39Q6ZRI6 1047 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 TRAPPC11Q7Z392 1133 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 CEP57Q86XR8 500 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 APPL2Q8NEU8 664 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 NOC3LQ8WTT2 800 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 SUSD6Q92537 303 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 CASP10Q92851 521 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 CCDC127Q96BQ5 260 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 ANKRD36BP1Q96IX9 119 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 SENP8Q96LD8 212 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 ZNF560Q96MR9 790 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 ASB2Q96Q27 587 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 MED15Q96RN5 788 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 POP1Q99575 1024 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 DUSP9Q99956 384 aaKnown RBP9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 NUP62CLQ9H1M0 184 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 S1PR5Q9H228 398 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 DZANK1Q9NVP4 752 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 GDAP2Q9NXN4 497 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 FBXL5Q9UKA1 691 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 FBXW11Q9UKB1 542 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 FRMD4BQ9Y2L6 1034 aa9.51□□□□□ -0.89
NSMCE1-206ENST00000563900 MTCL1Q9Y4B5 1905 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 KPNA7A9QM74 516 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 GOLGA6L22H0YM25 854 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 IKBKBO14920 756 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 MBTPS2O43462 519 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 TGM5O43548 720 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 VNN1O95497 513 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 GLUD1P00367 558 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 CST3P01034 146 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 TNNC2P02585 160 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 DLATP10515 647 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 BMP1P13497 986 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 HOXB8P17481 243 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 PSMC2P35998 433 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 KCNQ1P51787 676 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 AP3M2P53677 418 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 MRPS5P82675 430 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 RBP5P82980 135 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 BFSP1Q12934 665 aa9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 SMAD4Q13485 552 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-206ENST00000563900 STIM1Q13586 685 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms