RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 KCNC3Q14003 757 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 TMEM132DQ14C87 1099 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 PTPROQ16827 1216 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 TIGD5Q53EQ6 642 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 KIAA0319Q5VV43 1072 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 MAFAQ8NHW3 353 aaPredicted RBP15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 AUTS2Q8WXX7 1259 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 B3GALT6Q96L58 329 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 COLEC11Q9BWP8 271 aa15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 NSUN3Q9H649 340 aaKnown RBP15.93■□□□□ 0.14
SCAMP2-203ENST00000563663 TRIM49BA6NDI0 452 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 C2orf71A6NGG8 1288 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 ZNF233A6NK53 670 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 PIRO00625 290 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 AKAP3O75969 853 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 B3GAT3O94766 335 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 RPL9P32969 192 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 PBX1P40424 430 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 CLDN10P78369 228 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 KRT17Q04695 432 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 HYAL1Q12794 435 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 PSMD6Q15008 389 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 EDRF1Q3B7T1 1238 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 FILIP1LQ4L180 1135 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 RTP2Q5QGT7 225 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 C1orf220Q5T0J3 134 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 DCLRE1AQ6PJP8 1040 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 TMEM139Q8IV31 216 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 MRPL43Q8N983 215 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 C1orf127Q8N9H9 656 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 OR5B17Q8NGF7 314 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 FAM212AQ96EL1 285 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 BORCS6Q96GS4 357 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 PANX2Q96RD6 677 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 KIAA1586Q9HCI6 787 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 TRMT1Q9NXH9 659 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 SIX4Q9UIU6 781 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 ITIH6Q6UXX5 1313 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 SPTLC1O15269 473 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 BRCC3P46736 316 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 DSG1Q02413 1049 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 CTC1Q2NKJ3 1217 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 PLPP4Q5VZY2 271 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 C9orf57Q5W0N0 161 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 ANKRD40Q6AI12 368 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 TTI2Q6NXR4 508 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 NT5DC4Q86YG4 428 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 RDH13Q8NBN7 331 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 VN1R2Q8NFZ6 395 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 ZNF516Q92618 1163 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 DDX27Q96GQ7 796 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 NAA15Q9BXJ9 866 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 L2HGDHQ9H9P8 463 aa15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 LIMA1Q9UHB6 759 aaKnown RBP15.92■□□□□ 0.14
SCAMP2-203ENST00000563663 SF3B1O75533 1304 aaKnown RBP eCLIP15.91■□□□□ 0.144e-10■■■■■ 40.1
SCAMP2-203ENST00000563663 I3L4J1 428 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 KIF20AO95235 890 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 GLP2RO95838 553 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 FGFR3P22607 806 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 NR2F2P24468 414 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 LMBRD2Q68DH5 695 aaPredicted RBP15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 PDE12Q6L8Q7 609 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 FOXR2Q6PJQ5 311 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 TC2NQ8N9U0 490 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 EEF2KMTQ96G04 330 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 BAG1Q99933 345 aaPredicted RBP15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 DUSP9Q99956 384 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 MTMR12Q9C0I1 747 aa15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 NGRNQ9NPE2 291 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 PUF60Q9UHX1 559 aaKnown RBP15.91■□□□□ 0.14
SCAMP2-203ENST00000563663 MTCL1Q9Y4B5 1905 aaKnown RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 CALUO43852 315 aaPredicted RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 EXOC3O60645 756 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 LTBRP36941 435 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 PPP1R2P41236 205 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 ETF1P62495 437 aaKnown RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 CCDC85BQ15834 202 aaPredicted RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 DUSP6Q16828 381 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 PARD3BQ8TEW8 1205 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 POP1Q99575 1024 aaKnown RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 PRDM6Q9NQX0 595 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 MAPK13O15264 365 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 CCNE1P24864 410 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 DLG4P78352 724 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 PAK1Q13153 545 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 SMC1AQ14683 1233 aaKnown RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 TMC7Q7Z402 723 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 WDR49Q8IV35 697 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 GPR65Q8IYL9 337 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 MICALL1Q8N3F8 863 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 BEST2Q8NFU1 509 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 DHTKD1Q96HY7 919 aaPredicted RBP15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 SUSD3Q96L08 255 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 CGRRF1Q99675 332 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 RXFP1Q9HBX9 757 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 ENTPD7Q9NQZ7 604 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 DPP3Q9NY33 737 aa15.9■□□□□ 0.14
SCAMP2-203ENST00000563663 LRRIQ3A6PVS8 624 aaPredicted RBP15.89■□□□□ 0.13
SCAMP2-203ENST00000563663 M0QZQ0 153 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms