RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SLC2A4RGQ9NR83 387 aa6.3□□□□□ -1.4
LINC00254-201ENST00000563416 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
LINC00254-201ENST00000563416 FAM30AQ9NZY2 134 aa6.3□□□□□ -1.4
LINC00254-201ENST00000563416 FZD1Q9UP38 647 aa6.3□□□□□ -1.4
LINC00254-201ENST00000563416 NPHP4O75161 1426 aaPredicted RBP6.3□□□□□ -1.4
LINC00254-201ENST00000563416 RAB3GAP2Q9H2M9 1393 aa6.3□□□□□ -1.4
LINC00254-201ENST00000563416 TMEM2Q9UHN6 1383 aa6.3□□□□□ -1.4
LINC00254-201ENST00000563416 DRGXA6NNA5 263 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 RNASET2O00584 256 aaKnown RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 HTRA2O43464 458 aaPredicted RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 DTNBO60941 627 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 RPS6KA4O75676 772 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 AMY1AP04745 511 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 HLA-DOAP06340 250 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 LAG3P18627 525 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 PCSK1P29120 753 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 ACVRL1P37023 503 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 NEK2P51955 445 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 CHN2P52757 468 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 RNASE9P60153 205 aaKnown RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 IDI1Q13907 227 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 UBXN2BQ14CS0 331 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 CSRP2Q16527 193 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 TMEM240Q5SV17 173 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 ZNF529Q6P280 563 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 SYT12Q8IV01 421 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 XRN1Q8IZH2 1706 aaKnown RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 SLC16A11Q8NCK7 471 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 TMX3Q96JJ7 454 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 PHACTR3Q96KR7 559 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 MMRN2Q9H8L6 949 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 DDX56Q9NY93 547 aaKnown RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 RUVBL1Q9Y265 456 aaKnown RBP6.29□□□□□ -1.4
LINC00254-201ENST00000563416 ATP11BQ9Y2G3 1177 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 IPPQ9Y573 584 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 PCDHA13Q9Y5I0 950 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 SETBP1Q9Y6X0 1596 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 CPS1P31327 1500 aa6.29□□□□□ -1.4
LINC00254-201ENST00000563416 CCDC154A6NI56 674 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 ITGB1P05556 798 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 ZSCAN20P17040 1043 aaPredicted RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 VCAM1P19320 739 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 CTXN1P60606 82 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 ATP8B2P98198 1209 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 RAB39AQ14964 217 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 ODF1Q14990 250 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 TIGD2Q4W5G0 525 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 FNDC7Q5VTL7 733 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 MED25Q71SY5 747 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 ZGPATQ8N5A5 531 aaKnown RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 NLGN4YQ8NFZ3 816 aaPredicted RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 LENG9Q96B70 501 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 CLIP3Q96DZ5 547 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 C11orf54Q9H0W9 315 aaPredicted RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 LIMCH1Q9UPQ0 1083 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 LUC7L2Q9Y383 392 aaKnown RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 CHST2Q9Y4C5 530 aa6.28□□□□□ -1.4
LINC00254-201ENST00000563416 USP15Q9Y4E8 981 aaPredicted RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 CFAP20Q9Y6A4 193 aaKnown RBP6.28□□□□□ -1.4
LINC00254-201ENST00000563416 PNPLA7Q6ZV29 1317 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 RIMS2Q9UQ26 1411 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 AHRRA9YTQ3 701 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 PDGFRBP09619 1106 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 LY6G5CQ5SRR4 150 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 DACT2Q5SW24 774 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 FAM102AQ5T9C2 384 aaPredicted RBP6.27□□□□□ -1.41
LINC00254-201ENST00000563416 GADL1Q6ZQY3 521 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 LRRC55Q6ZSA7 311 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 TTC7BQ86TV6 843 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 RHOT2Q8IXI1 618 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 AKIP1Q9NQ31 210 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 MAN1C1Q9NR34 630 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 AASDHPPTQ9NRN7 309 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 GPRC5BQ9NZH0 403 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 SLC23A1Q9UHI7 598 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 LAMC1P11047 1609 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 KNDC1Q76NI1 1749 aa6.27□□□□□ -1.41
LINC00254-201ENST00000563416 WNT10BO00744 389 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 KIAA0391O15091 583 aaKnown RBP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 ALDH1L1O75891 902 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 IL33O95760 270 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 ABHD16AO95870 558 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 TARDBPQ13148 414 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 C3orf36Q3SXR2 165 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 PDCD4Q53EL6 469 aaKnown RBP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 AGAP9Q5VTM2 703 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 ARMC6Q6NXE6 501 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 KCNV1Q6PIU1 500 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 UBE3BQ7Z3V4 1068 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 CMTR2Q8IYT2 770 aaKnown RBP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 CPA6Q8N4T0 437 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 MYEOVQ96EZ4 313 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 SCAND2PQ9GZW5 306 aaPredicted RBP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 ZNF768Q9H5H4 540 aaKnown RBP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 METTL14Q9HCE5 456 aaKnown RBP6.26□□□□□ -1.41
LINC00254-201ENST00000563416 CALCOCO1Q9P1Z2 691 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 SERPINB13Q9UIV8 391 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 FPGT-TNNI3KV9GXZ4 949 aa6.26□□□□□ -1.41
LINC00254-201ENST00000563416 PLEKHG1Q9ULL1 1385 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms