RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SMRP1Q8NCR6 262 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 SUSD6Q92537 303 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 CASP10Q92851 521 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 MTMR12Q9C0I1 747 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBR1-204ENST00000563239 RMND1Q9NWS8 449 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 CD207Q9UJ71 328 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 CDH22Q9UJ99 828 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 PCDHB8Q9UN66 801 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 TIMM13Q9Y5L4 95 aaPredicted RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 BACE2Q9Y5Z0 518 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 SCN1AP35498 2009 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 FSD2A1L4K1 749 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 EXOC3O60645 756 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 AKAP3O75969 853 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 OAZ2O95190 189 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 C1RP00736 705 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 ITGB3P05106 788 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 ADH1AP07327 375 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 SPATA31D3P0C874 917 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 POLR2BP30876 1174 aaKnown RBP9.23□□□□□ -0.93
UBR1-204ENST00000563239 DLG4P78352 724 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 CLDN10P78369 228 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 SMAD4Q13485 552 aaKnown RBP9.23□□□□□ -0.93
UBR1-204ENST00000563239 RAB33AQ14088 237 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 SURF1Q15526 300 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 CAMK4Q16566 473 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 AAK1Q2M2I8 961 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 CENPPQ6IPU0 288 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 SLC8B1Q6J4K2 584 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 SPATA31D4Q6ZUB0 917 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 PPFIBP1Q86W92 1011 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 WDR49Q8IV35 697 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 GLYCTKQ8IVS8 523 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 ZC3H3Q8IXZ2 948 aaKnown RBP9.23□□□□□ -0.93
UBR1-204ENST00000563239 PARD3BQ8TEW8 1205 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 CCDC127Q96BQ5 260 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 SENP8Q96LD8 212 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 NECAB3Q96P71 396 aaPredicted RBP9.23□□□□□ -0.93
UBR1-204ENST00000563239 CGRRF1Q99675 332 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 RTP3Q9BQQ7 232 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 APOL5Q9BWW9 433 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 HOOK1Q9UJC3 728 aaKnown RBP9.23□□□□□ -0.93
UBR1-204ENST00000563239 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 AGAP1Q9UPQ3 857 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 TTC28Q96AY4 2481 aa9.23□□□□□ -0.93
UBR1-204ENST00000563239 TSC2P49815 1807 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 LRRIQ3A6PVS8 624 aaPredicted RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 CALUO43852 315 aaPredicted RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 KIF20AO95235 890 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 VNN2O95498 520 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 GLUD1P00367 558 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 CST3P01034 146 aaPredicted RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 CYP11A1P05108 521 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 WEE2P0C1S8 567 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 DLATP10515 647 aaKnown RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 HOXB8P17481 243 aaPredicted RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 TYMPP19971 482 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 PAX3P23760 479 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 NR2F2P24468 414 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 OR1D2P34982 312 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 TAF6P49848 677 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 CREMQ03060 361 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 SMAD2Q15796 467 aaKnown RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 DUOXA2Q1HG44 320 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 EDRF1Q3B7T1 1238 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 PUS10Q3MIT2 529 aaKnown RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 PDXDC1Q6P996 788 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 ANKS3Q6ZW76 656 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 TRAPPC11Q7Z392 1133 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 LIMS2Q7Z4I7 341 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 CSGALNACT2Q8N6G5 542 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 APPL2Q8NEU8 664 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 GPT2Q8TD30 523 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 HDAC7Q8WUI4 952 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 CACTINQ8WUQ7 758 aaKnown RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 ZNF707Q96C28 371 aaPredicted RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 ADAM7Q9H2U9 754 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 CLSTN2Q9H4D0 955 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 CD320Q9NPF0 282 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 MAN1C1Q9NR34 630 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 DZANK1Q9NVP4 752 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 FBXW11Q9UKB1 542 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 ITGA11Q9UKX5 1188 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 USP15Q9Y4E8 981 aaPredicted RBP9.22□□□□□ -0.93
UBR1-204ENST00000563239 CDY1Q9Y6F8 540 aa9.22□□□□□ -0.93
UBR1-204ENST00000563239 WDR27A2RRH5 827 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 TRIM49BA6NDI0 452 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 KPNA7A9QM74 516 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
UBR1-204ENST00000563239 BIN1O00499 593 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 CYB561D2O14569 222 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 MAPK13O15264 365 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 RFPL2O75678 378 aa9.21□□□□□ -0.94
UBR1-204ENST00000563239 ABLIM3O94929 683 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms