RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 XKR3Q5GH77 459 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 TDRD10Q5VZ19 366 aaKnown RBP13.88□□□□□ -0.19
USB1-207ENST00000563149 TRMT1LQ7Z2T5 733 aaKnown RBP13.88□□□□□ -0.19
USB1-207ENST00000563149 TBC1D1Q86TI0 1168 aaPredicted RBP13.88□□□□□ -0.19
USB1-207ENST00000563149 CEP57Q86XR8 500 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 MAML1Q92585 1016 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 HEMGNQ9BXL5 484 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
USB1-207ENST00000563149 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 KLHL14Q9P2G3 628 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 CTNNAL1Q9UBT7 734 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 BAIAP2L1Q9UHR4 511 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
USB1-207ENST00000563149 PCDHB4Q9Y5E5 795 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 CD2APQ9Y5K6 639 aa13.88□□□□□ -0.19
USB1-207ENST00000563149 TLR3O15455 904 aaKnown RBP13.87□□□□□ -0.19
USB1-207ENST00000563149 MAGEB2O15479 319 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 TJP3O95049 919 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 VNN1O95497 513 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 DSG3P32926 999 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 PTPN7P35236 360 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 OAZ1P54368 228 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
USB1-207ENST00000563149 BAATQ14032 418 aaPredicted RBP13.87□□□□□ -0.19
USB1-207ENST00000563149 MPP2Q14168 576 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 RASA2Q15283 850 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 GSTA5Q7RTV2 222 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 NSUN6Q8TEA1 469 aaKnown RBP13.87□□□□□ -0.19
USB1-207ENST00000563149 CGRRF1Q99675 332 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 C11orf70Q9BRQ4 267 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 SLC9A2Q9UBY0 812 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 SEPT9Q9UHD8 586 aaPredicted RBP13.87□□□□□ -0.19
USB1-207ENST00000563149 ZNRF3Q9ULT6 936 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 AGAP1Q9UPQ3 857 aa13.87□□□□□ -0.19
USB1-207ENST00000563149 GSTTP1A0A1W2PQM5 241 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 VWA5AO00534 786 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 WNT10BO00744 389 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
USB1-207ENST00000563149 LIASO43766 372 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 ATP5HO75947 161 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CALCAP01258 141 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CLTAP09496 248 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 AP3M2P53677 418 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 PRKCEQ02156 737 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 TNFAIP1Q13829 316 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 EAPPQ56P03 285 aaPredicted RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 MIS18BP1Q6P0N0 1132 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CYP4X1Q8N118 509 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 TCP11Q8WWU5 503 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 RBM15Q96T37 977 aaKnown RBP eCLIP13.86□□□□□ -0.19
USB1-207ENST00000563149 CXorf56Q9H5V9 222 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 RPAP3Q9H6T3 665 aaPredicted RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 ARHGEF3Q9NR81 526 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 RASA4BC9J798 803 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 RASA4O43374 803 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CALB1P05937 261 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CETPP11597 493 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 TAC1P20366 129 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 NAMPTP43490 491 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 VPS41P49754 854 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 SOX10P56693 466 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 TAP1Q03518 808 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 MORF4L2Q15014 288 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CCDC142Q17RM4 750 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 P3H1Q32P28 736 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 SRRM1Q8IYB3 904 aaKnown RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 RBBP8NLQ8NC74 664 aaPredicted RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 GDAP1Q8TB36 358 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 KLHL29Q96CT2 875 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 PHACTR1Q9C0D0 580 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 EBF2Q9HAK2 575 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 JPH1Q9HDC5 661 aaPredicted RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 DNAJC17Q9NVM6 304 aaKnown RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 DDX56Q9NY93 547 aaKnown RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
USB1-207ENST00000563149 STARD13Q9Y3M8 1113 aa13.86□□□□□ -0.19
USB1-207ENST00000563149 CCNB1P14635 433 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 ELF1P32519 619 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 NLRP11P59045 1033 aaKnown RBP13.85□□□□□ -0.19
USB1-207ENST00000563149 ACTR2P61160 394 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 TMEM270Q6UE05 265 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 ASRGL1Q7L266 308 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 PHLDB2Q86SQ0 1253 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 TRABD2AQ86V40 505 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 PNMA8AQ86V59 439 aaPredicted RBP13.85□□□□□ -0.19
USB1-207ENST00000563149 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 ALLCQ8N6M5 410 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 C9orf72Q96LT7 481 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 SLITRK1Q96PX8 696 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 PITPNM3Q9BZ71 974 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 ZNF518BQ9C0D4 1074 aa13.85□□□□□ -0.19
USB1-207ENST00000563149 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms