RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.05■□□□□ -0
SPG7-206ENST00000562775 ATP8B3O60423 1300 aa15.04■□□□□ -0
SPG7-206ENST00000562775 ANO9A1A5B4 782 aa15.04■□□□□ -0
SPG7-206ENST00000562775 RCCD1A6NED2 376 aa15.04■□□□□ -0
SPG7-206ENST00000562775 MEIS3P2A8K0S8 358 aa15.04■□□□□ -0
SPG7-206ENST00000562775 PTGESO14684 152 aa15.04■□□□□ -0
SPG7-206ENST00000562775 PJA2O43164 708 aa15.04■□□□□ -0
SPG7-206ENST00000562775 CAPN2P17655 700 aa15.04■□□□□ -0
SPG7-206ENST00000562775 TMEM270Q6UE05 265 aa15.04■□□□□ -0
SPG7-206ENST00000562775 AGMOQ6ZNB7 445 aa15.04■□□□□ -0
SPG7-206ENST00000562775 RPUSD2Q8IZ73 545 aaKnown RBP15.04■□□□□ -0
SPG7-206ENST00000562775 RBBP8NLQ8NC74 664 aaPredicted RBP15.04■□□□□ -0
SPG7-206ENST00000562775 SLC20A1Q8WUM9 679 aa15.04■□□□□ -0
SPG7-206ENST00000562775 ZFP42Q96MM3 310 aa15.04■□□□□ -0
SPG7-206ENST00000562775 FTHL17Q9BXU8 183 aa15.04■□□□□ -0
SPG7-206ENST00000562775 LACRTQ9GZZ8 138 aa15.04■□□□□ -0
SPG7-206ENST00000562775 FAM124BQ9H5Z6 455 aaPredicted RBP15.04■□□□□ -0
SPG7-206ENST00000562775 CYP3A43Q9HB55 503 aa15.04■□□□□ -0
SPG7-206ENST00000562775 UBN1Q9NPG3 1134 aa15.04■□□□□ -0
SPG7-206ENST00000562775 RGS18Q9NS28 235 aa15.04■□□□□ -0
SPG7-206ENST00000562775 CISHQ9NSE2 258 aa15.04■□□□□ -0
SPG7-206ENST00000562775 POLIQ9UNA4 740 aa15.04■□□□□ -0
SPG7-206ENST00000562775 PIRO00625 290 aa15.03■□□□□ -0
SPG7-206ENST00000562775 ABL1P00519 1130 aa15.03■□□□□ -0
SPG7-206ENST00000562775 WEE2P0C1S8 567 aa15.03■□□□□ -0
SPG7-206ENST00000562775 ATF7P17544 494 aaPredicted RBP15.03■□□□□ -0
SPG7-206ENST00000562775 CHRNB2P17787 502 aa15.03■□□□□ -0
SPG7-206ENST00000562775 MLH1P40692 756 aa15.03■□□□□ -0
SPG7-206ENST00000562775 ZNF132P52740 706 aa15.03■□□□□ -0
SPG7-206ENST00000562775 CDR2Q01850 454 aa15.03■□□□□ -0
SPG7-206ENST00000562775 TLE2Q04725 743 aa15.03■□□□□ -0
SPG7-206ENST00000562775 C9orf57Q5W0N0 161 aa15.03■□□□□ -0
SPG7-206ENST00000562775 ZNF677Q86XU0 584 aa15.03■□□□□ -0
SPG7-206ENST00000562775 GSTCDQ8NEC7 633 aa15.03■□□□□ -0
SPG7-206ENST00000562775 DDX1Q92499 740 aaKnown RBP15.03■□□□□ -0
SPG7-206ENST00000562775 LPPQ93052 612 aa15.03■□□□□ -0
SPG7-206ENST00000562775 PPP1R10Q96QC0 940 aaKnown RBP15.03■□□□□ -0
SPG7-206ENST00000562775 RPS6KC1Q96S38 1066 aa15.03■□□□□ -0
SPG7-206ENST00000562775 GAD1Q99259 594 aa15.03■□□□□ -0
SPG7-206ENST00000562775 ACP6Q9NPH0 428 aa15.03■□□□□ -0
SPG7-206ENST00000562775 RNF19AQ9NV58 838 aa15.03■□□□□ -0
SPG7-206ENST00000562775 SLC38A7Q9NVC3 462 aa15.03■□□□□ -0
SPG7-206ENST00000562775 TFR2Q9UP52 801 aa15.03■□□□□ -0
SPG7-206ENST00000562775 C9IYK1 514 aa15.02■□□□□ -0
SPG7-206ENST00000562775 KIF5CO60282 957 aa15.02■□□□□ -0
SPG7-206ENST00000562775 NBNO60934 754 aa15.02■□□□□ -0
SPG7-206ENST00000562775 PARNO95453 639 aaKnown RBP15.02■□□□□ -0
SPG7-206ENST00000562775 CD58P19256 250 aa15.02■□□□□ -0
SPG7-206ENST00000562775 LRPAP1P30533 357 aa15.02■□□□□ -0
SPG7-206ENST00000562775 TNNC1P63316 161 aa15.02■□□□□ -0
SPG7-206ENST00000562775 SOX4Q06945 474 aaPredicted RBP15.02■□□□□ -0
SPG7-206ENST00000562775 FAAP100Q0VG06 881 aa15.02■□□□□ -0
SPG7-206ENST00000562775 GPNMBQ14956 572 aa15.02■□□□□ -0
SPG7-206ENST00000562775 TRIM60Q495X7 471 aa15.02■□□□□ -0
SPG7-206ENST00000562775 TAF3Q5VWG9 929 aa15.02■□□□□ -0
SPG7-206ENST00000562775 SCARA5Q6ZMJ2 495 aa15.02■□□□□ -0
SPG7-206ENST00000562775 SLC24A5Q71RS6 500 aa15.02■□□□□ -0
SPG7-206ENST00000562775 ZNF598Q86UK7 904 aaKnown RBP15.02■□□□□ -0
SPG7-206ENST00000562775 RTN4RL1Q86UN2 441 aaPredicted RBP15.02■□□□□ -0
SPG7-206ENST00000562775 ECHDC2Q86YB7 292 aa15.02■□□□□ -0
SPG7-206ENST00000562775 TTC39CQ8N584 583 aa15.02■□□□□ -0
SPG7-206ENST00000562775 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
SPG7-206ENST00000562775 RSAD1Q9HA92 442 aa15.02■□□□□ -0
SPG7-206ENST00000562775 SEPT11Q9NVA2 429 aaKnown RBP15.02■□□□□ -0
SPG7-206ENST00000562775 MYO1AQ9UBC5 1043 aa15.02■□□□□ -0
SPG7-206ENST00000562775 TRIM10Q9UDY6 481 aa15.02■□□□□ -0
SPG7-206ENST00000562775 INTUQ9ULD6 942 aa15.02■□□□□ -0
SPG7-206ENST00000562775 GUCA1BQ9UMX6 200 aa15.02■□□□□ -0
SPG7-206ENST00000562775 ARL5CA6NH57 179 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 PPEF2O14830 753 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 EOMESO95936 686 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 THP07101 528 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 MMEP08473 750 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 H2AFZP0C0S5 128 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 GZMAP12544 262 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 PNPLA4P41247 253 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 GNG11P61952 73 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 FAM189BP81408 668 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 FMO1Q01740 532 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 PLEKHG4Q58EX7 1191 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 H2AFVQ71UI9 128 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 ZNF560Q96MR9 790 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 TMEM106CQ9BVX2 250 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 SDCBP2Q9H190 292 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 TSPYL2Q9H2G4 693 aaPredicted RBP15.02□□□□□ -0.01
SPG7-206ENST00000562775 HIPK3Q9H422 1215 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 C11orf49Q9H6J7 331 aa15.02□□□□□ -0.01
SPG7-206ENST00000562775 GNA15P30679 374 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 CDH8P55286 799 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 SYT10Q6XYQ8 523 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.01□□□□□ -0.01
SPG7-206ENST00000562775 PALB2Q86YC2 1186 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 RNF169Q8NCN4 708 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 DBF4BQ8NFT6 615 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 LINC01599Q8WXQ3 324 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 SEPT8Q92599 483 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 APBB2Q92870 758 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 PAWRQ96IZ0 340 aaKnown RBP15.01□□□□□ -0.01
SPG7-206ENST00000562775 PCDHB18PQ96TA0 734 aa15.01□□□□□ -0.01
SPG7-206ENST00000562775 IRX2Q9BZI1 471 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms