RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 PNMA6AP0CW24 399 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 VCAM1P19320 739 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CHRM3P20309 590 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 HIST2H2ACQ16777 129 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 GOLGA7BQ2TAP0 167 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 DCAF6Q58WW2 860 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 HIST2H2AA3Q6FI13 130 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 FMR1NBQ8N0W7 255 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CALML6Q8TD86 181 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 FAM162AQ96A26 154 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 ISCA1Q9BUE6 129 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 RAD18Q9NS91 495 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CDK12Q9NYV4 1490 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CEP170Q5SW79 1584 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 HEATR9A2RTY3 570 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TEX33O43247 280 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 DEPDC1Q5TB30 811 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 SRBD1Q8N5C6 995 aaKnown RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 BHMTQ93088 406 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 TMEM117Q9H0C3 514 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 CRLS1Q9UJA2 301 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 SLC25A13Q9UJS0 675 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 LRRIQ3A6PVS8 624 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 APOA1P02647 267 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 PLA2G4FQ68DD2 849 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 ERAP2Q6P179 960 aa11.78□□□□□ -0.52
RPAP1-204ENST00000562303 SYDE1Q6ZW31 735 aaPredicted RBP11.78□□□□□ -0.52
RPAP1-204ENST00000562303 FLT1P17948 1338 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 DISP1Q96F81 1524 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 ERVK-7P63135 1459 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 ENO1P06733 434 aaKnown RBP11.77□□□□□ -0.52
RPAP1-204ENST00000562303 MYL2P10916 166 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 CENPPQ6IPU0 288 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 LRRC8BQ6P9F7 803 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 CINPQ9BW66 212 aaPredicted RBP11.77□□□□□ -0.52
RPAP1-204ENST00000562303 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.52
RPAP1-204ENST00000562303 AMACRQ9UHK6 382 aa11.77□□□□□ -0.52
RPAP1-204ENST00000562303 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 ENTPD3O75355 529 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 WDR47O94967 919 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 CSE1LP55060 971 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 KDSRQ06136 332 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 PDK1Q15118 436 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 ARHGAP18Q8N392 663 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 UBA3Q8TBC4 463 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 COLEC11Q9BWP8 271 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 OSBPL10Q9BXB5 764 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 MRPL1Q9BYD6 325 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 PKD2L2Q9NZM6 624 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 RRN3P2A6NIE6 340 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 KDM6AO15550 1401 aaPredicted RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 NCAM1P13591 858 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 SOX11P35716 441 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 HSPA9P38646 679 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 NLRP11P59045 1033 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 E4F1Q66K89 784 aaPredicted RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 NOTUMQ6P988 496 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 NSUN4Q96CB9 384 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 REEP2Q9BRK0 252 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 C17orf80Q9BSJ5 609 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 PNPLA7Q6ZV29 1317 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 E2F8A0AVK6 867 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 PSMD14O00487 310 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 SRP72O76094 671 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 NLRP14Q86W24 1093 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 CLEC4FQ8N1N0 589 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 HPS3Q969F9 1004 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 GRAMD1AQ96CP6 724 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 TMEM169Q96HH4 297 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 ATP6V1G3Q96LB4 118 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 STK33Q9BYT3 514 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 ENTPD7Q9NQZ7 604 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 PRMT7Q9NVM4 692 aaPredicted RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 UVRAGQ9P2Y5 699 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 SPASTQ9UBP0 616 aa11.77□□□□□ -0.53
RPAP1-204ENST00000562303 LIMA1Q9UHB6 759 aaKnown RBP11.77□□□□□ -0.53
RPAP1-204ENST00000562303 HBP1O60381 514 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 H2AFYO75367 372 aaKnown RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 KRT16P08779 473 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 PGM1P36871 562 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SERPINB9P50453 376 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 MRPL28Q13084 256 aaKnown RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 BBS7Q8IWZ6 715 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 TRMT2AQ8IZ69 625 aaKnown RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 C10orf53Q8N6V4 93 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 SLC35G2Q8TBE7 412 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
RPAP1-204ENST00000562303 NSMCE4AQ9NXX6 385 aa11.76□□□□□ -0.53
RPAP1-204ENST00000562303 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms