RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
PKD1-225ENST00000562297 DDX3YO15523 660 aaKnown RBP17.68■□□□□ 0.42
PKD1-225ENST00000562297 ADAMTS4O75173 837 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 KRT19P08727 400 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 GNAT1P11488 350 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 NAA35Q5VZE5 725 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 CXCL17Q6UXB2 119 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 SCARA5Q6ZMJ2 495 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 TRIM72Q6ZMU5 477 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 MON1BQ7L1V2 547 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 NT5DC4Q86YG4 428 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 NUP85Q9BW27 656 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 RBM12Q9NTZ6 932 aaKnown RBP17.68■□□□□ 0.42
PKD1-225ENST00000562297 ARGLU1Q9NWB6 273 aaPredicted RBP17.68■□□□□ 0.42
PKD1-225ENST00000562297 RNF186Q9NXI6 227 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 UVRAGQ9P2Y5 699 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 ALG6Q9Y672 507 aa17.68■□□□□ 0.42
PKD1-225ENST00000562297 CCDC151A5D8V7 595 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 GUCY2FP51841 1108 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 CRYBB1P53674 252 aaPredicted RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 SP3Q02447 781 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 DEFB115Q30KQ5 88 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 NME8Q8N427 588 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 ZNF564Q8TBZ8 553 aaPredicted RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 AVENQ9NQS1 362 aaPredicted RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 SNTG2Q9NY99 539 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 GTF2IRD1Q9UHL9 959 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 THSD7BQ9C0I4 1608 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 THAP12O43422 761 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 ZRANB2O95218 330 aaKnown RBP eCLIP17.67■□□□□ 0.42
PKD1-225ENST00000562297 ATICP31939 592 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 WDR72Q3MJ13 1102 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 ZNF667Q5HYK9 610 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 DCAF12L1Q5VU92 463 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 WDR93Q6P2C0 686 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 CD302Q8IX05 232 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 ACTRT1Q8TDG2 376 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 SNX27Q96L92 541 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 ZMAT2Q96NC0 199 aaKnown RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 CFHR5Q9BXR6 569 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 SDCBP2Q9H190 292 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 PLEKHA5Q9HAU0 1116 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 OGFRQ9NZT2 677 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 NXF1Q9UBU9 619 aaKnown RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 CNOT8Q9UFF9 292 aaKnown RBP17.67■□□□□ 0.42
PKD1-225ENST00000562297 TMEM59LQ9UK28 342 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 ITGA11Q9UKX5 1188 aa17.67■□□□□ 0.42
PKD1-225ENST00000562297 TARSL2A2RTX5 802 aaKnown RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 RARBP10826 455 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 YY1P25490 414 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 AXLP30530 894 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 POLR2BP30876 1174 aaKnown RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 SSTR3P32745 418 aaPredicted RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 VSNL1P62760 191 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 BRD3Q15059 726 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 NBPF20Q3BBV1 942 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 CC2D1AQ6P1N0 951 aaPredicted RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 TAF2Q6P1X5 1199 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 ALKAL1Q6UXT8 129 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 APBB1IPQ7Z5R6 666 aaPredicted RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 PASD1Q8IV76 773 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 REM2Q8IYK8 340 aaPredicted RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 RASGEF1CQ8N431 466 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 NXF3Q9H4D5 531 aaKnown RBP17.66■□□□□ 0.42
PKD1-225ENST00000562297 PRDM10Q9NQV6 1147 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 DPP3Q9NY33 737 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 HES2Q9Y543 173 aa17.66■□□□□ 0.42
PKD1-225ENST00000562297 STAU1O95793 577 aaKnown RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 MYBL1P10243 752 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 ELNP15502 786 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 CCND3P30281 292 aaPredicted RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 NSFP46459 744 aaKnown RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 RAP1GAPP47736 663 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 PTP4A2Q12974 167 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 ZBTB6Q15916 424 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 ZNF394Q53GI3 561 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 PHF13Q86YI8 300 aaPredicted RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 TFAP2BQ92481 460 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 CD101Q93033 1021 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 RPS6KC1Q96S38 1066 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 DERAQ9Y315 318 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 TUBBP07437 444 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 RRM1P23921 792 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 BRD2P25440 801 aaKnown RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 UBXN11Q5T124 520 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 GDF6Q6KF10 455 aaPredicted RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 ALG3Q92685 438 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 KIF12Q96FN5 646 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 HPDLQ96IR7 371 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 VCPIP1Q96JH7 1222 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 BTBD6Q96KE9 485 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 SMYD3Q9H7B4 428 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 AGAP1Q9UPQ3 857 aa17.65■□□□□ 0.42
PKD1-225ENST00000562297 PIN4Q9Y237 131 aaKnown RBP17.65■□□□□ 0.42
PKD1-225ENST00000562297 CEP104O60308 925 aa17.64■□□□□ 0.41
PKD1-225ENST00000562297 PRKAR2AP13861 404 aaKnown RBP17.64■□□□□ 0.41
PKD1-225ENST00000562297 CDH8P55286 799 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms