RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 ASIC2Q16515 512 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 TSR1Q2NL82 804 aaKnown RBP13.77□□□□□ -0.21
COTL1-202ENST00000561707 FAM117BQ6P1L5 589 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 URGCPQ8TCY9 931 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 TAF4BQ92750 862 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
COTL1-202ENST00000561707 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 TBC1D13Q9NVG8 400 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 AIPL1Q9NZN9 384 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 HCSTQ9UBK5 93 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
COTL1-202ENST00000561707 TBKBP1A7MCY6 615 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 F8VZ95 297 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 PODXLO00592 558 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 CYP26A1O43174 497 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 STAU1O95793 577 aaKnown RBP13.76□□□□□ -0.21
COTL1-202ENST00000561707 FECHP22830 423 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 HNRNPH3P31942 346 aaKnown RBP13.76□□□□□ -0.21
COTL1-202ENST00000561707 RPL9P32969 192 aaKnown RBP13.76□□□□□ -0.21
COTL1-202ENST00000561707 ASPAP45381 313 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 LILRA4P59901 499 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
COTL1-202ENST00000561707 GCNT1Q02742 428 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 TUSC3Q13454 348 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 MTF1Q14872 753 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 PAN2Q504Q3 1202 aaKnown RBP13.76□□□□□ -0.21
COTL1-202ENST00000561707 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 LRRC52Q8N7C0 313 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 UBR7Q8N806 425 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 SHC3Q92529 594 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 SYN2Q92777 582 aaPredicted RBP13.76□□□□□ -0.21
COTL1-202ENST00000561707 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 NIF3L1Q9GZT8 377 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 NRDE2Q9H7Z3 1164 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 VRTNQ9H8Y1 702 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 ACP6Q9NPH0 428 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 PYCARDQ9ULZ3 195 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 MYO6Q9UM54 1294 aa13.76□□□□□ -0.21
COTL1-202ENST00000561707 BRCA2P51587 3418 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 SOWAHDA6NJG2 315 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 F8W810 466 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 AMHP03971 560 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 PFKMP08237 780 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 KRT5P13647 590 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 CD58P19256 250 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 RFX1P22670 979 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 TBXAS1P24557 533 aaPredicted RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 CLCN1P35523 988 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 EIF4A3P38919 411 aaKnown RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 TAF6P49848 677 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 DSC1Q08554 894 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 MYO1EQ12965 1108 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 MEA1Q16626 185 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 UPP1Q16831 310 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 HGSNATQ68CP4 663 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 RAD9BQ6WBX8 426 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 ENOSF1Q7L5Y1 443 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 COLGALT2Q8IYK4 626 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 FAM71AQ8IYT1 594 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 ABI1Q8IZP0 508 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 TRIM44Q96DX7 344 aaPredicted RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 DDX27Q96GQ7 796 aaKnown RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 FAM193BQ96PV7 902 aaPredicted RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.21
COTL1-202ENST00000561707 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 NUCKS1Q9H1E3 243 aaKnown RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 ZNHIT6Q9NWK9 470 aaKnown RBP13.75□□□□□ -0.21
COTL1-202ENST00000561707 ARHGAP20Q9P2F6 1191 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 DNAJB4Q9UDY4 337 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 SNX9Q9Y5X1 595 aa13.75□□□□□ -0.21
COTL1-202ENST00000561707 ZBBXA8MT70 800 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 KPNA7A9QM74 516 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 I3L4J1 428 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 DGKIO75912 1065 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 SERPING1P05155 500 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 FERP16591 822 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 BRCC3P46736 316 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 TNNC1P63316 161 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 KLHL30Q0D2K2 578 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 SOWAHAQ2M3V2 549 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 FAM81BQ96LP2 452 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 MRPL45Q9BRJ2 306 aaKnown RBP13.74□□□□□ -0.21
COTL1-202ENST00000561707 CISHQ9NSE2 258 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 CXXC1Q9P0U4 656 aaPredicted RBP13.74□□□□□ -0.21
COTL1-202ENST00000561707 NME7Q9Y5B8 376 aa13.74□□□□□ -0.21
COTL1-202ENST00000561707 CYB561D2O14569 222 aa13.73□□□□□ -0.21
COTL1-202ENST00000561707 HOXA2O43364 376 aa13.73□□□□□ -0.21
COTL1-202ENST00000561707 EFCAB14O75071 495 aa13.73□□□□□ -0.21
COTL1-202ENST00000561707 B3GAT3O94766 335 aa13.73□□□□□ -0.21
COTL1-202ENST00000561707 BAIAP3O94812 1187 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms