RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ZNF697Q5TEC3 545 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 FUT10Q6P4F1 479 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 VPS52Q8N1B4 723 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 LRRC52Q8N7C0 313 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 FAM200AQ8TCP9 573 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 HPDLQ96IR7 371 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 FAM161BQ96MY7 647 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 VWA8A3KMH1 1905 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 ATG2AQ2TAZ0 1938 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 CHD9Q3L8U1 2897 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 LRRC10BA6NIK2 292 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 SPTLC1O15269 473 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 LPXNO60711 386 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 LRRN2O75325 713 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 HLA-DRAP01903 254 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 AFPP02771 609 aaKnown RBP11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ATP1A3P13637 1013 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 PRKCSHP14314 528 aaPredicted RBP11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ZNF18P17022 549 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 PAX3P23760 479 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 DNAJB1P25685 340 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ATICP31939 592 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 MXI1P50539 228 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ERVFC1P60507 584 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 UBE3AQ05086 875 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ELAVL2Q12926 359 aaKnown RBP11.06□□□□□ -0.64
LRRC28-221ENST00000561276 NCOA4Q13772 614 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 CAMK1Q14012 370 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 GRIN2CQ14957 1233 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 KRT31Q15323 416 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 WDR72Q3MJ13 1102 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 SV2CQ496J9 727 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 VWA3BQ502W6 1294 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 MIIPQ5JXC2 388 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 FAM171A1Q5VUB5 890 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 DSTYKQ6XUX3 929 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 CEP57Q86XR8 500 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 MICAL1Q8TDZ2 1067 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 TAS1R2Q8TE23 839 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 POF1BQ8WVV4 589 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 SEMA4DQ92854 862 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ELMO3Q96BJ8 720 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 B3GALT6Q96L58 329 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 SENP8Q96LD8 212 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 VN1R3Q9BXE9 311 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 XYLT2Q9H1B5 865 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 VPS16Q9H269 839 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 NDST4Q9H3R1 872 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 PRDM12Q9H4Q4 367 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 RAB20Q9NX57 234 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 LIMA1Q9UHB6 759 aaKnown RBP11.06□□□□□ -0.64
LRRC28-221ENST00000561276 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 LZTS1Q9Y250 596 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 COQ4Q9Y3A0 265 aa11.06□□□□□ -0.64
LRRC28-221ENST00000561276 SF3B1O75533 1304 aaKnown RBP eCLIP11.06□□□□□ -0.64
LRRC28-221ENST00000561276 GOLGA6L19H0YKK7 550 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 M0QZQ0 153 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
LRRC28-221ENST00000561276 CYB561D2O14569 222 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 PMM2O15305 246 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 P4HA2O15460 535 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 N4BP1O75113 896 aaKnown RBP11.05□□□□□ -0.64
LRRC28-221ENST00000561276 CXCL14O95715 111 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 SOD2P04179 222 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 PIK3CAP42336 1068 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 AARSP49588 968 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRRC28-221ENST00000561276 FXR1P51114 621 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRRC28-221ENST00000561276 TPM4P67936 248 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 CETN1Q12798 172 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 USP41Q3LFD5 358 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 KIAA0319Q5VV43 1072 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 KIAA1841Q6NSI8 718 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 Q7L0L9 218 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 TMC7Q7Z402 723 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-221ENST00000561276 RNF214Q8ND24 703 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 ANKRD20A12PQ8NF67 263 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 TAF4BQ92750 862 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 SUSD3Q96L08 255 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 PI4K2AQ9BTU6 479 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.647e-8■■■■■ 186.3
LRRC28-221ENST00000561276 TLR9Q9NR96 1032 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 CHST7Q9NS84 486 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 GDAP2Q9NXN4 497 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 TAB2Q9NYJ8 693 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
LRRC28-221ENST00000561276 STK39Q9UEW8 545 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 SNX9Q9Y5X1 595 aa11.05□□□□□ -0.64
LRRC28-221ENST00000561276 HUS1O60921 280 aa11.04□□□□□ -0.64
LRRC28-221ENST00000561276 CLSTN1O94985 981 aa11.04□□□□□ -0.64
LRRC28-221ENST00000561276 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
LRRC28-221ENST00000561276 ASS1P00966 412 aaKnown RBP11.04□□□□□ -0.64
LRRC28-221ENST00000561276 TPM2P07951 284 aa11.04□□□□□ -0.64
LRRC28-221ENST00000561276 CTSAP10619 480 aa11.04□□□□□ -0.64
LRRC28-221ENST00000561276 C7P10643 843 aa11.04□□□□□ -0.64
LRRC28-221ENST00000561276 FGFR3P22607 806 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms