RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TRAF3IP3Q9Y228 551 aa15.03■□□□□ -0
TPM1-230ENST00000561266 CDY1Q9Y6F8 540 aa15.03■□□□□ -0
TPM1-230ENST00000561266 SYN3O14994 580 aa15.02■□□□□ -0
TPM1-230ENST00000561266 XPOTO43592 962 aaKnown RBP15.02■□□□□ -0
TPM1-230ENST00000561266 TRAPPC3O43617 180 aa15.02■□□□□ -0
TPM1-230ENST00000561266 VNN2O95498 520 aa15.02■□□□□ -0
TPM1-230ENST00000561266 GLUD1P00367 558 aa15.02■□□□□ -0
TPM1-230ENST00000561266 CST3P01034 146 aaPredicted RBP15.02■□□□□ -0
TPM1-230ENST00000561266 OR4Q2P0C623 313 aa15.02■□□□□ -0
TPM1-230ENST00000561266 CDR1P51861 262 aa15.02■□□□□ -0
TPM1-230ENST00000561266 DLG4P78352 724 aa15.02■□□□□ -0
TPM1-230ENST00000561266 RAB33AQ14088 237 aa15.02■□□□□ -0
TPM1-230ENST00000561266 TMC5Q6UXY8 1006 aa15.02■□□□□ -0
TPM1-230ENST00000561266 PPFIBP1Q86W92 1011 aa15.02■□□□□ -0
TPM1-230ENST00000561266 NT5DC4Q86YG4 428 aa15.02■□□□□ -0
TPM1-230ENST00000561266 SLC9A9Q8IVB4 645 aa15.02■□□□□ -0
TPM1-230ENST00000561266 SMARCE1Q969G3 411 aa15.02■□□□□ -0
TPM1-230ENST00000561266 ELMO3Q96BJ8 720 aa15.02■□□□□ -0
TPM1-230ENST00000561266 CCDC127Q96BQ5 260 aa15.02■□□□□ -0
TPM1-230ENST00000561266 ZNF707Q96C28 371 aaPredicted RBP15.02■□□□□ -0
TPM1-230ENST00000561266 EEF2KMTQ96G04 330 aa15.02■□□□□ -0
TPM1-230ENST00000561266 GSDMAQ96QA5 445 aa15.02■□□□□ -0
TPM1-230ENST00000561266 UHRF1Q96T88 793 aaPredicted RBP15.02■□□□□ -0
TPM1-230ENST00000561266 RTP3Q9BQQ7 232 aa15.02■□□□□ -0
TPM1-230ENST00000561266 ADAM7Q9H2U9 754 aa15.02■□□□□ -0
TPM1-230ENST00000561266 CGNQ9P2M7 1197 aaKnown RBP15.02■□□□□ -0
TPM1-230ENST00000561266 FBXL5Q9UKA1 691 aa15.02■□□□□ -0
TPM1-230ENST00000561266 FBXW11Q9UKB1 542 aa15.02■□□□□ -0
TPM1-230ENST00000561266 AGAP1Q9UPQ3 857 aa15.02■□□□□ -0
TPM1-230ENST00000561266 BACE2Q9Y5Z0 518 aa15.02■□□□□ -0
TPM1-230ENST00000561266 MYO10Q9HD67 2058 aa15.02□□□□□ -0.01
TPM1-230ENST00000561266 CUL9Q8IWT3 2517 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 DOCK8Q8NF50 2099 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 WDR27A2RRH5 827 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 EXOC3O60645 756 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
TPM1-230ENST00000561266 DLATP10515 647 aaKnown RBP15.01□□□□□ -0.01
TPM1-230ENST00000561266 ROR1Q01973 937 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 CAMK4Q16566 473 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 ZNF658Q5TYW1 1059 aaPredicted RBP15.01□□□□□ -0.01
TPM1-230ENST00000561266 SLC8B1Q6J4K2 584 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 DSTYKQ6XUX3 929 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 ANKS3Q6ZW76 656 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 CSGALNACT2Q8N6G5 542 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 KREMEN2Q8NCW0 462 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 TMEM174Q8WUU8 243 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 CCDC47Q96A33 483 aaKnown RBP15.01□□□□□ -0.01
TPM1-230ENST00000561266 CGRRF1Q99675 332 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 POMKQ9H5K3 350 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 KIAA1586Q9HCI6 787 aa15.01□□□□□ -0.01
TPM1-230ENST00000561266 FSD2A1L4K1 749 aa15□□□□□ -0.01
TPM1-230ENST00000561266 TRIM49BA6NDI0 452 aa15□□□□□ -0.01
TPM1-230ENST00000561266 LRRIQ3A6PVS8 624 aaPredicted RBP15□□□□□ -0.01
TPM1-230ENST00000561266 BIN1O00499 593 aa15□□□□□ -0.01
TPM1-230ENST00000561266 DLL1O00548 723 aa15□□□□□ -0.01
TPM1-230ENST00000561266 HCRTO43612 131 aa15□□□□□ -0.01
TPM1-230ENST00000561266 AKAP3O75969 853 aa15□□□□□ -0.01
TPM1-230ENST00000561266 OAZ2O95190 189 aa15□□□□□ -0.01
TPM1-230ENST00000561266 SEC24AO95486 1093 aa15□□□□□ -0.01
TPM1-230ENST00000561266 HOXB8P17481 243 aaPredicted RBP15□□□□□ -0.01
TPM1-230ENST00000561266 TAF6P49848 677 aa15□□□□□ -0.01
TPM1-230ENST00000561266 ARPP19P56211 112 aa15□□□□□ -0.01
TPM1-230ENST00000561266 ZP2Q05996 745 aa15□□□□□ -0.01
TPM1-230ENST00000561266 CTXN3Q4LDR2 81 aa15□□□□□ -0.01
TPM1-230ENST00000561266 WSCD1Q658N2 575 aa15□□□□□ -0.01
TPM1-230ENST00000561266 ADSSL1Q8N142 457 aa15□□□□□ -0.01
TPM1-230ENST00000561266 OR10T2Q8NGX3 314 aa15□□□□□ -0.01
TPM1-230ENST00000561266 PARD3BQ8TEW8 1205 aa15□□□□□ -0.01
TPM1-230ENST00000561266 CACTINQ8WUQ7 758 aaKnown RBP15□□□□□ -0.01
TPM1-230ENST00000561266 DZANK1Q9NVP4 752 aa15□□□□□ -0.01
TPM1-230ENST00000561266 CCDC195A0A1B0GUA6 201 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 KPNA7A9QM74 516 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 PPP1R3GB7ZBB8 358 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CYB561D2O14569 222 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 ABLIM3O94929 683 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 SMC2O95347 1197 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 PAPLNO95428 1278 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CYP11A1P05108 521 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 KRT19P08727 400 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 TMEM191BP0C7N4 346 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 TYMPP19971 482 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 SP100P23497 879 aaPredicted RBP14.99□□□□□ -0.01
TPM1-230ENST00000561266 MORC3Q14149 939 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CBX2Q14781 532 aaPredicted RBP14.99□□□□□ -0.01
TPM1-230ENST00000561266 NFIL3Q16649 462 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 PUS10Q3MIT2 529 aaKnown RBP14.99□□□□□ -0.01
TPM1-230ENST00000561266 COBLL1Q53SF7 1204 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CEP135Q66GS9 1140 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 ANKRD40Q6AI12 368 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 RNF19BQ6ZMZ0 732 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 TRAPPC11Q7Z392 1133 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 GPR149Q86SP6 731 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 OSTM1Q86WC4 334 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 GOLGA5Q8TBA6 731 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 CRISPLD1Q9H336 500 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 SFXN1Q9H9B4 322 aa14.99□□□□□ -0.01
TPM1-230ENST00000561266 ITGA11Q9UKX5 1188 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms