RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 POLR2BP30876 1174 aaKnown RBP18.3■□□□□ 0.52
HDDC3-206ENST00000561036 MYO1EQ12965 1108 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 SCARA3Q6AZY7 606 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 LRRC57Q8N9N7 239 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 SLC43A3Q8NBI5 491 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 SLC35G2Q8TBE7 412 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 NXF3Q9H4D5 531 aaKnown RBP18.3■□□□□ 0.52
HDDC3-206ENST00000561036 UBQLN1Q9UMX0 589 aaKnown RBP18.3■□□□□ 0.52
HDDC3-206ENST00000561036 ST3GAL5Q9UNP4 418 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 AGAP1Q9UPQ3 857 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 TADA3O75528 432 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 CYP1A1P04798 512 aaPredicted RBP18.29■□□□□ 0.52
HDDC3-206ENST00000561036 CYP1A2P05177 515 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 PAEPP09466 180 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 MYBL1P10243 752 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 UNGP13051 313 aaPredicted RBP18.29■□□□□ 0.52
HDDC3-206ENST00000561036 CYP3A5P20815 502 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 THPOP40225 353 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 CKAP4Q07065 602 aaKnown RBP18.29■□□□□ 0.52
HDDC3-206ENST00000561036 WDR72Q3MJ13 1102 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 MEI1Q5TIA1 1274 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 TWF2Q6IBS0 349 aaKnown RBP18.29■□□□□ 0.52
HDDC3-206ENST00000561036 USP38Q8NB14 1042 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 WNT8BQ93098 351 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 TLR10Q9BXR5 811 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 THAP2Q9H0W7 228 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
HDDC3-206ENST00000561036 GTF3C4Q9UKN8 822 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 IPPQ9Y573 584 aa18.29■□□□□ 0.52
HDDC3-206ENST00000561036 THAP12O43422 761 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 LSM8O95777 96 aaKnown RBP18.28■□□□□ 0.52
HDDC3-206ENST00000561036 ABCB4P21439 1286 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 HTRA3P83110 453 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 CENPCQ03188 943 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 TRIM71Q2Q1W2 868 aaKnown RBP18.28■□□□□ 0.52
HDDC3-206ENST00000561036 SMG8Q8ND04 991 aaKnown RBP18.28■□□□□ 0.52
HDDC3-206ENST00000561036 VCPIP1Q96JH7 1222 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 RPGRIP1Q96KN7 1286 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 ZMAT2Q96NC0 199 aaKnown RBP18.28■□□□□ 0.52
HDDC3-206ENST00000561036 TRAIPQ9BWF2 469 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 PDCL3Q9H2J4 239 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 ERVK-5Q9HDB9 667 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 AVENQ9NQS1 362 aaPredicted RBP18.28■□□□□ 0.52
HDDC3-206ENST00000561036 UVRAGQ9P2Y5 699 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 RNF14Q9UBS8 474 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 POLIQ9UNA4 740 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 PHF24Q9UPV7 400 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 PTCH2Q9Y6C5 1203 aa18.28■□□□□ 0.52
HDDC3-206ENST00000561036 A0A0U1RQG5 324 aaPredicted RBP18.27■□□□□ 0.52
HDDC3-206ENST00000561036 CES2O00748 559 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 TLR3O15455 904 aaKnown RBP18.27■□□□□ 0.52
HDDC3-206ENST00000561036 CTSHP09668 335 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 WEE2P0C1S8 567 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
HDDC3-206ENST00000561036 TNNC1P63316 161 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 FBXO47Q5MNV8 452 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 DNAAF5Q86Y56 855 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 ZNF606Q8WXB4 792 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 ARHGEF26Q96DR7 871 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 BEGAINQ9BUH8 593 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 ZNF518BQ9C0D4 1074 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 PARP2Q9UGN5 583 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 PCDHGC3Q9UN70 934 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 HES2Q9Y543 173 aa18.27■□□□□ 0.52
HDDC3-206ENST00000561036 SMIM28A0A1B0GU29 152 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 MED7O43513 233 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 CD58P19256 250 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 AKAP5P24588 427 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 NSFP46459 744 aaKnown RBP18.26■□□□□ 0.51
HDDC3-206ENST00000561036 RAB27AP51159 221 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 INCA1Q0VD86 236 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 C11orf63Q6NUN7 778 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 SCARA5Q6ZMJ2 495 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF572Q7Z3I7 529 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-206ENST00000561036 PHF13Q86YI8 300 aaPredicted RBP18.26■□□□□ 0.51
HDDC3-206ENST00000561036 UBXN4Q92575 508 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 GOLGA1Q92805 767 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF653Q96CK0 615 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.26■□□□□ 0.51
HDDC3-206ENST00000561036 ABCB6Q9NP58 842 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 FAM105AQ9NUU6 356 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 CTTNBP2NLQ9P2B4 639 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 KIAA1257Q9ULG3 409 aa18.26■□□□□ 0.51
HDDC3-206ENST00000561036 MYH10P35580 1976 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 A0A1W2PQ45 241 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 A0A1W2PQY0 241 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 CTAGE15A4D2H0 777 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 KBTBD13C9JR72 458 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 ZNF623O75123 536 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 CILPO75339 1184 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 FTCDO95954 541 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 CTAGE8P0CG41 777 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 ZSCAN20P17040 1043 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 CDH5P33151 784 aaPredicted RBP18.25■□□□□ 0.51
HDDC3-206ENST00000561036 PNPLA4P41247 253 aa18.25■□□□□ 0.51
HDDC3-206ENST00000561036 GUCY2FP51841 1108 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms