RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TCEAL4Q96EI5 215 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 FAM212AQ96EL1 285 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 ZNF512Q96ME7 567 aaPredicted RBP17.62■□□□□ 0.41
SNX1-213ENST00000561026 DDX23Q9BUQ8 820 aaKnown RBP17.62■□□□□ 0.41
SNX1-213ENST00000561026 ST6GALNAC4Q9H4F1 302 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 CEP72Q9P209 647 aa17.62■□□□□ 0.41
SNX1-213ENST00000561026 MYH15Q9Y2K3 1946 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 KANSL1LA0AUZ9 987 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 ANKRD63C9JTQ0 380 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 CCR2P41597 374 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 LILRA4P59901 499 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 TWF1Q12792 350 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 CYP4A22Q5TCH4 519 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 TANGO2Q6ICL3 276 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 JADE1Q6IE81 842 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 IQCEQ6IPM2 695 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 DSTYKQ6XUX3 929 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 PDZD4Q76G19 769 aaPredicted RBP17.61■□□□□ 0.41
SNX1-213ENST00000561026 USP37Q86T82 979 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 ELMOD1Q8N336 334 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 ELSPBP1Q96BH3 223 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 PLA2G2FQ9BZM2 168 aa17.61■□□□□ 0.41
SNX1-213ENST00000561026 FBXO2Q9UK22 296 aaPredicted RBP17.61■□□□□ 0.41
SNX1-213ENST00000561026 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
SNX1-213ENST00000561026 WDR87Q6ZQQ6 2873 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 OR6C75A6NL08 312 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 PPEF2O14830 753 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 GLULP15104 373 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 TYMPP19971 482 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 SYT1P21579 422 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 ACOT2P49753 483 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 FAM78AQ5JUQ0 283 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 SLFN12LQ6IEE8 588 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 ZNF720Q7Z2F6 126 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 C1orf210Q8IVY1 113 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 LEMD2Q8NC56 503 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 STK17AQ9UEE5 414 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 CCDC39Q9UFE4 941 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 DERAQ9Y315 318 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 MTF2Q9Y483 593 aaPredicted RBP17.6■□□□□ 0.41
SNX1-213ENST00000561026 STYXL1Q9Y6J8 313 aa17.6■□□□□ 0.41
SNX1-213ENST00000561026 TISP43B9A030 160 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 NRG2O14511 850 aaPredicted RBP17.59■□□□□ 0.41
SNX1-213ENST00000561026 LRRN2O75325 713 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 VNN2O95498 520 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 NFICP08651 508 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 OR4Q2P0C623 313 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 PAX3P23760 479 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 FCARP24071 287 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 EPHA5P54756 1037 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 RESTQ13127 1097 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 GPR17Q13304 367 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 ADALQ6DHV7 355 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 OVOS1Q6IE37 1185 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 FAM173BQ6P4H8 233 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 DYMQ7RTS9 669 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 SENP8Q96LD8 212 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 PGLYRP2Q96PD5 576 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 OSBPL6Q9BZF3 934 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 ASB7Q9H672 318 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 ZFP14Q9HCL3 533 aa17.59■□□□□ 0.41
SNX1-213ENST00000561026 PIRO00625 290 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 SPTLC1O15269 473 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 MOSPD3O75425 235 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 POU5F1Q01860 360 aaKnown RBP17.58■□□□□ 0.4
SNX1-213ENST00000561026 DUSP4Q13115 394 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 MYBPC2Q14324 1141 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 TMEM132DQ14C87 1099 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 RRAGBQ5VZM2 374 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 SFR1Q86XK3 245 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 INTS4Q96HW7 963 aaKnown RBP17.58■□□□□ 0.4
SNX1-213ENST00000561026 ZSWIM3Q96MP5 696 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 ASB16Q96NS5 453 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 CRISPLD1Q9H336 500 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 ASAH2Q9NR71 780 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 AGO2Q9UKV8 859 aaKnown RBP17.58■□□□□ 0.4
SNX1-213ENST00000561026 C2CD2Q9Y426 696 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 YIPF1Q9Y548 306 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 GVINP1Q7Z2Y8 2422 aa17.58■□□□□ 0.4
SNX1-213ENST00000561026 CACNA1IQ9P0X4 2223 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 ANO9A1A5B4 782 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 MYMKA6NI61 221 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 FAM170BA6NMN3 283 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 PPP1R37O75864 691 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 ODC1P11926 461 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 MYL4P12829 197 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 CD72P21854 359 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 TXLNAP40222 546 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
SNX1-213ENST00000561026 UBXN2BQ14CS0 331 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 CENPPQ6IPU0 288 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 SV2BQ7L1I2 683 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 SMARCD2Q92925 531 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 HVCN1Q96D96 273 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 STRA6Q9BX79 667 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 BCO2Q9BYV7 579 aa17.57■□□□□ 0.4
SNX1-213ENST00000561026 IKZF4Q9H2S9 585 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms