RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 CPA3P15088 417 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 CA4P22748 312 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 KLRK1P26718 216 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 INHBCP55103 352 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 AP2B1P63010 937 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 CCDC174Q6PII3 467 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 LVRNQ6Q4G3 990 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 IZUMO2Q6UXV1 221 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 WDR66Q8TBY9 1149 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 HIC2Q96JB3 615 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 FAM81BQ96LP2 452 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 FAM20AQ96MK3 541 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 FNBP1Q96RU3 617 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 SUDS3Q9H7L9 328 aaPredicted RBP16.97■□□□□ 0.31
PBX1-219ENST00000560641 AVENQ9NQS1 362 aaPredicted RBP16.97■□□□□ 0.31
PBX1-219ENST00000560641 HEY2Q9UBP5 337 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 FRMD4BQ9Y2L6 1034 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 WASF2Q9Y6W5 498 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
PBX1-219ENST00000560641 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
PBX1-219ENST00000560641 TMEM110-MUSTN1A8MSY1 372 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 ALOX15BO15296 676 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 ITGA2BP08514 1039 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 FAM200BP0CF97 657 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 VAV1P15498 845 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 RBM26Q5T8P6 1007 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 GJA10Q969M2 543 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 AGPAT3Q9NRZ7 376 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 UBTFL6P0CB48 400 aaPredicted RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 ATF3P18847 181 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 CETN2P41208 172 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 ZNF543Q08ER8 600 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 KCNA1Q09470 495 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 USP4Q13107 963 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 THOC5Q13769 683 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 TBCCQ15814 346 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 C12orf56Q8IXR9 622 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 DDX17Q92841 729 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 DDX27Q96GQ7 796 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 METTL5Q9NRN9 209 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 TOM1O60784 492 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 RNASEH1O60930 286 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 FMO1Q01740 532 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 PRKD1Q15139 912 aaPredicted RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 PHLDB2Q86SQ0 1253 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 SPATA24Q86W54 205 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 CCDC110Q8TBZ0 833 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 C9orf72Q96LT7 481 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 ZHX3Q9H4I2 956 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
PBX1-219ENST00000560641 NDE1Q9NXR1 346 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 MTMR4Q9NYA4 1195 aa16.96■□□□□ 0.31
PBX1-219ENST00000560641 DNALI1O14645 258 aaPredicted RBP16.95■□□□□ 0.3
PBX1-219ENST00000560641 ZBTB5O15062 677 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 DESP17661 470 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 ARFIP2P53365 341 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 LENG9Q96B70 501 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 RTFDC1Q9BY42 306 aaPredicted RBP16.95■□□□□ 0.3
PBX1-219ENST00000560641 KCND2Q9NZV8 630 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 RSPH10B2B2RC85 870 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 RSPH10BP0C881 870 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 PGM1P36871 562 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 CREB5Q02930 508 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 R3HDM1Q15032 1099 aaKnown RBP16.95■□□□□ 0.3
PBX1-219ENST00000560641 DNAL1Q4LDG9 190 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 C1QTNF12Q5T7M4 302 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 RINT1Q6NUQ1 792 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 KLC3Q6P597 504 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 STXBP4Q6ZWJ1 553 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 DGCR14Q96DF8 476 aaKnown RBP16.95■□□□□ 0.3
PBX1-219ENST00000560641 MAK16Q9BXY0 300 aaKnown RBP16.95■□□□□ 0.3
PBX1-219ENST00000560641 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
PBX1-219ENST00000560641 PSTPIP2Q9H939 334 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 PLK2Q9NYY3 685 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 VAV3Q9UKW4 847 aa16.95■□□□□ 0.3
PBX1-219ENST00000560641 LDHCP07864 332 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 TSHRP16473 764 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 AMPD1P23109 780 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 PCNX4Q63HM2 1172 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 ADGRD1Q6QNK2 874 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 PRUNE1Q86TP1 453 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 PDCD7Q8N8D1 485 aaKnown RBP16.94■□□□□ 0.3
PBX1-219ENST00000560641 BANPQ8N9N5 519 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 TIMMDC1Q9NPL8 285 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 LDHBP07195 334 aaKnown RBP16.94■□□□□ 0.3
PBX1-219ENST00000560641 ESRRAP11474 423 aaPredicted RBP16.94■□□□□ 0.3
PBX1-219ENST00000560641 ADRA2BP18089 450 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 STAT3P40763 770 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 MORF4L2Q15014 288 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 ARHGAP44Q17R89 818 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 C1orf186Q6ZWK4 172 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 ZNF720Q7Z2F6 126 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 CPNE8Q86YQ8 564 aa16.94■□□□□ 0.3
PBX1-219ENST00000560641 HERPUD2Q9BSE4 406 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms