RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SRBD1Q8N5C6 995 aaKnown RBP13.83□□□□□ -0.19
CSPG4P11-201ENST00000560634 ABHD8Q96I13 439 aa13.83□□□□□ -0.19
CSPG4P11-201ENST00000560634 TASP1Q9H6P5 420 aa13.83□□□□□ -0.19
CSPG4P11-201ENST00000560634 PIM2Q9P1W9 311 aa13.83□□□□□ -0.19
CSPG4P11-201ENST00000560634 CDYLQ9Y232 598 aa13.83□□□□□ -0.19
CSPG4P11-201ENST00000560634 PRPF4O43172 522 aaKnown RBP eCLIP13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 ACADSP16219 412 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 RGS4P49798 205 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 HOMEZQ8IX15 550 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 TNIP2Q8NFZ5 429 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 NSL1Q96IY1 281 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 MS4A14Q96JA4 679 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CLMNQ96JQ2 1002 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 AGAP1Q9UPQ3 857 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CPDO75976 1380 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 EIF4E1BA6NMX2 242 aaKnown RBP13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 SULT1E1P49888 294 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 KYNUQ16719 465 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 NUP93Q8N1F7 819 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 RBBP8NLQ8NC74 664 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 VPS37AQ8NEZ2 397 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 B4GALNT2Q8NHY0 566 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 TADA1Q96BN2 335 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 PLEKHA8Q96JA3 519 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 TMEM245Q9H330 911 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CXorf56Q9H5V9 222 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 C10orf88Q9H8K7 445 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 RBM12Q9NTZ6 932 aaKnown RBP13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 DBR1Q9UK59 544 aaKnown RBP13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 SPDYE5A6NIY4 337 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CYP27B1O15528 508 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CYBBP04839 570 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CLK1P49759 484 aaKnown RBP13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 NCOA4Q13772 614 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 SPDYE7PQ495Y7 208 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 SPDYAQ5MJ70 313 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 TMEM154Q6P9G4 183 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 ANKS1AQ92625 1134 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 INPP5DQ92835 1189 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 LZTS1Q9Y250 596 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
CSPG4P11-201ENST00000560634 ACADSBP45954 432 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 FBXW10Q5XX13 1052 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 C3orf62Q6ZUJ4 267 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 P3H2Q8IVL5 708 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 ATPAF2Q8N5M1 289 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 TC2NQ8N9U0 490 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 USP38Q8NB14 1042 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 CELF1Q92879 486 aaKnown RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 E2F7Q96AV8 911 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 RBBP8Q99708 897 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 C21orf2O43822 256 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 ECE2O60344 883 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 CENPPQ6IPU0 288 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PPP4R4Q6NUP7 873 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 AGAP3Q96P47 875 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 CARD9Q9H257 536 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 C20orf96Q9NUD7 363 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PRR23D1E9PI22 279 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 AIM2O14862 343 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PRR23D2P0DMB1 279 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PLA2G4AP47712 749 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 FMR1Q06787 632 aaKnown RBP eCLIP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 IFNEQ86WN2 208 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 MMP19Q99542 508 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 CCT7Q99832 543 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 AGPAT5Q9NUQ2 364 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PCMTD2Q9NV79 361 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 RGL1Q9NZL6 768 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PDP2Q9P2J9 529 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 PRR36Q9H6K5 1346 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 FKBP9O95302 570 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 STX5Q13190 355 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 NKX1-1Q15270 411 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 TTC39BQ5VTQ0 682 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 FKBP9P1Q75LS8 142 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 SERPINB12Q96P63 405 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 ALG6Q9Y672 507 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
CSPG4P11-201ENST00000560634 EVPLLA8MZ36 301 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 RAD51CO43502 376 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 RBP3P10745 1247 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 AKR1B1P15121 316 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 GTF2H3Q13889 308 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 SNRNP35Q16560 246 aaKnown RBP13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 LRRC36Q1X8D7 754 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 KBTBD12Q3ZCT8 623 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 SBK1Q52WX2 424 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 MICU2Q8IYU8 434 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 APPL2Q8NEU8 664 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 SLC30A5Q8TAD4 765 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 LATS2Q9NRM7 1088 aa13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 H2AFY2Q9P0M6 372 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P11-201ENST00000560634 MARCOQ9UEW3 520 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms