RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 UVRAGQ9P2Y5 699 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 OGDHLQ9ULD0 1010 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 STARD13Q9Y3M8 1113 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 USH1CQ9Y6N9 552 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PIEZO1Q92508 2521 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 CACNA1GO43497 2377 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ADGRA3Q8IWK6 1321 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 TLDC2A0PJX2 215 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 KIAA0391O15091 583 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 MSCO60682 206 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ATP2C2O75185 946 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 SNUPNO95149 360 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ATP5BP06576 529 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 RPSAP08865 295 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ABHD2P08910 425 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 GZMAP12544 262 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 CYBAP13498 195 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 GALCP54803 685 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 NCALDP61601 193 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 GPC5P78333 572 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ROR2Q01974 943 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 EPHA7Q15375 998 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 PRR16Q569H4 304 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ANKRD20A2Q5SQ80 823 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 PRAMEF19Q5SWL8 479 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ANKRD20A1Q5TYW2 823 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ANKRD20A3Q5VUR7 823 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 LHX8Q68G74 356 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 MIS18BP1Q6P0N0 1132 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 RGS9BPQ6ZS82 235 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 NECAB2Q7Z6G3 386 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 RELL1Q8IUW5 271 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 CCDC105Q8IYK2 499 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 TRPV1Q8NER1 839 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 OR2W6PQ8NHA6 318 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 SLC35G2Q8TBE7 412 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 NSUN6Q8TEA1 469 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 ATP8B4Q8TF62 1192 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 SCFD1Q8WVM8 642 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 DPF3Q92784 378 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 SLC5A5Q92911 643 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 NAF1Q96HR8 494 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 PAWRQ96IZ0 340 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 CDHR1Q96JP9 859 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 FAM210AQ96ND0 272 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 RMDN3Q96TC7 470 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 MPHOSPH6Q99547 160 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 TSC22D3Q99576 134 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 RIT2Q99578 217 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 MXRA8Q9BRK3 442 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 PDCD2LQ9BRP1 358 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 TINF2Q9BSI4 451 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 DPH5Q9H2P9 285 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 SAR1AQ9NR31 198 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 CNOT8Q9UFF9 292 aaKnown RBP9.09□□□□□ -0.95
CCDC33-209ENST00000560565 LGALS13Q9UHV8 139 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 LRRC42Q9Y546 428 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 PCDHA2Q9Y5H9 948 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 UBIAD1Q9Y5Z9 338 aa9.09□□□□□ -0.95
CCDC33-209ENST00000560565 TTC28Q96AY4 2481 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 DNAJC25-GNG10A0A024R161 153 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 FAM86B1E9PN63 330 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 MSH4O15457 936 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 DDX3YO15523 660 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SEPT4O43236 478 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 THAP12O43422 761 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 DIAPH2O60879 1101 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 NR3C1P04150 777 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 FAM86B2P0C5J1 330 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 RARAP10276 462 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PECAM1P16284 738 aaPredicted RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CYP11B2P19099 503 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 ATP6V1C1P21283 382 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CALB2P22676 271 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PAX7P23759 505 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 RPA1P27694 616 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CCND2P30279 289 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PCK1P35558 622 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SLC1A1P43005 524 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 YARSP54577 528 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 RNASE9P60153 205 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 MRPS25P82663 173 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CENPCQ03188 943 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 KLC1Q07866 573 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PPP2R5CQ13362 524 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 BAATQ14032 418 aaPredicted RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 SLC29A2Q14542 456 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 PGM5Q15124 567 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 RASA2Q15283 850 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 GSTA3Q16772 222 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 ARHGEF16Q5VV41 709 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 TCERG1LQ5VWI1 586 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CDCA2Q69YH5 1023 aaPredicted RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 IRGCQ6NXR0 463 aa9.08□□□□□ -0.96
CCDC33-209ENST00000560565 CCDC137Q6PK04 289 aaKnown RBP9.08□□□□□ -0.96
CCDC33-209ENST00000560565 NSMFQ6X4W1 530 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms