RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 GREB1Q4ZG55 1949 aa9.23□□□□□ -0.93
TRAF3-209ENST00000560463 ARL5CA6NH57 179 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 PTGESO14684 152 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 KRT86O43790 486 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 NBNO60934 754 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 FAM163BP0C2L3 166 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 ACO1P21399 889 aaKnown RBP9.22□□□□□ -0.93
TRAF3-209ENST00000560463 TNFAIP3P21580 790 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 LRPAP1P30533 357 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 RPL9P32969 192 aaKnown RBP9.22□□□□□ -0.93
TRAF3-209ENST00000560463 USP8P40818 1118 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 TNNC1P63316 161 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 NAB2Q15742 525 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 SV2CQ496J9 727 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 C9orf57Q5W0N0 161 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 PPP1R2P3Q6NXS1 205 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 AGMOQ6ZNB7 445 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 ZNF571Q7Z3V5 609 aaPredicted RBP9.22□□□□□ -0.93
TRAF3-209ENST00000560463 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 UBR7Q8N806 425 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 EPS8L1Q8TE68 723 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
TRAF3-209ENST00000560463 KAT5Q92993 513 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 PPP1R13BQ96KQ4 1090 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 AGPAT1Q99943 283 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 SYT11Q9BT88 431 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRAF3-209ENST00000560463 DNAI2Q9GZS0 605 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 TMEM39AQ9NV64 488 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 TMEM161AQ9NX61 479 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 KANSL3Q9P2N6 904 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 ADAMTS1Q9UHI8 967 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 TBX21Q9UL17 535 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 PCDHB4Q9Y5E5 795 aa9.22□□□□□ -0.93
TRAF3-209ENST00000560463 MYO16Q9Y6X6 1858 aa9.21□□□□□ -0.93
TRAF3-209ENST00000560463 MTCL1Q9Y4B5 1905 aaKnown RBP9.21□□□□□ -0.93
TRAF3-209ENST00000560463 A0A087X0T9 212 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ENPP3O14638 875 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 PJA2O43164 708 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 CYP26A1O43174 497 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 HOXA2O43364 376 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 FAM228BP0C875 321 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GZMAP12544 262 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 KRT5P13647 590 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 CYP11B1P15538 503 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 MLH1P40692 756 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 MAGEA1P43355 309 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ASPAP45381 313 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 TAF6P49848 677 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 VAV2P52735 878 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 CDR2Q01850 454 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GFPT1Q06210 699 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 INCA1Q0VD86 236 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 KIF5AQ12840 1032 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GRIK3Q13003 919 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GPNMBQ14956 572 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 PTPN14Q15678 1187 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ARHGAP29Q52LW3 1261 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GLRA4Q5JXX5 417 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ALKBH5Q6P6C2 394 aaKnown RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 TMEM270Q6UE05 265 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 DPH6Q7L8W6 267 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 KIAA1328Q86T90 577 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ACRBPQ8NEB7 543 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GSTCDQ8NEC7 633 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 DBF4BQ8NFT6 615 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 SLC30A5Q8TAD4 765 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 LPPQ93052 612 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 C18orf25Q96B23 403 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 DDX27Q96GQ7 796 aaKnown RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ZFP42Q96MM3 310 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 UROC1Q96N76 676 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GAD1Q99259 594 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 ARID3AQ99856 593 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 DESI2Q9BSY9 194 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 TSGA10Q9BZW7 698 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 MCOLN1Q9GZU1 580 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 CXCL16Q9H2A7 254 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.942e-7■■■■■ 61.4
TRAF3-209ENST00000560463 CISHQ9NSE2 258 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 TRMT1Q9NXH9 659 aaKnown RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 GDAP2Q9NXN4 497 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 MYO1AQ9UBC5 1043 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
TRAF3-209ENST00000560463 TUBGCP4Q9UGJ1 667 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 NAGPAQ9UK23 515 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 INTUQ9ULD6 942 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 PCDHA13Q9Y5I0 950 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 UMODL1Q5DID0 1318 aa9.21□□□□□ -0.94
TRAF3-209ENST00000560463 USP27XA6NNY8 438 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 MEIS3P2A8K0S8 358 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 KPNA7A9QM74 516 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 ZNF263O14978 683 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 KIAA0355O15063 1070 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 TIMP1P01033 207 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 PAEPP09466 180 aa9.2□□□□□ -0.94
TRAF3-209ENST00000560463 GNA15P30679 374 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms