RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NIF3L1Q9GZT8 377 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 TUBGCP4Q9UGJ1 667 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 SCN1AP35498 2009 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 SCN10AQ9Y5Y9 1956 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 GNAT1P11488 350 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 TBXAS1P24557 533 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 ANXA13P27216 316 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 AP3M2P53677 418 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 GPC5P78333 572 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 TWF2Q6IBS0 349 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 PEX26Q7Z412 305 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 GOLGA1Q92805 767 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 TWNKQ96RR1 684 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 CCDC94Q9BW85 323 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 CELF4Q9BZC1 486 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 CHRNA1P02708 482 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 UNGP13051 313 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 HOXC8P31273 242 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 THPOP40225 353 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 GRM5P41594 1212 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 AFF1P51825 1210 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 MESDQ14696 234 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 LLGL1Q15334 1064 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 CLEC16AQ2KHT3 1053 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF667Q5HYK9 610 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 ARRDC4Q8NCT1 418 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF606Q8WXB4 792 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 TFAP2BQ92481 460 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 C11orf70Q9BRQ4 267 aa11.62□□□□□ -0.55
SNRPA1-211ENST00000560433 BTNL10A8MVZ5 291 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 ZMYND10O75800 440 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 RRM1P23921 792 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 IGFBP6P24592 240 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 CRYBB1P53674 252 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 HSP90AA2PQ14568 343 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 PTGISQ16647 500 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 UBXN11Q5T124 520 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 ACAD10Q6JQN1 1059 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 RABGGTAQ92696 567 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 HPDLQ96IR7 371 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 ZFP42Q96MM3 310 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 NUP85Q9BW27 656 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 UPF3AQ9H1J1 476 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 ASB7Q9H672 318 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 INTUQ9ULD6 942 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 HCRTO43612 131 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 HMGCRP04035 888 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 CD19P15391 556 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 RPS6KA1Q15418 735 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 CCDC181Q5TID7 509 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 CCSAPQ6IQ19 270 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 AADACL2Q6P093 401 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 NT5DC3Q86UY8 548 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 UBR7Q8N806 425 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 KLHDC9Q8NEP7 349 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 SH3TC2Q8TF17 1288 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 LPPQ93052 612 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 PNKPQ96T60 521 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 PARD6BQ9BYG5 372 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 ANKZF1Q9H8Y5 726 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 AGO3Q9H9G7 860 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 ST3GAL5Q9UNP4 418 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 IPPQ9Y573 584 aa11.61□□□□□ -0.55
SNRPA1-211ENST00000560433 LAMA3Q16787 3333 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 A0A0A6YYK5 440 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 KIF4AO95239 1232 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 INHAP05111 366 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 GZMAP12544 262 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 MRPS6P82932 125 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF211Q13398 564 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 DCAF4L1Q3SXM0 396 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 ADAT2Q7Z6V5 191 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 SMG8Q8ND04 991 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 C1orf131Q8NDD1 294 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 SNX27Q96L92 541 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 TJP2Q9UDY2 1190 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 ALG6Q9Y672 507 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 NCANO14594 1321 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 M0QZ92 97 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 RPS6KA5O75582 802 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 SEC31AO94979 1220 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 GHRP10912 638 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 NSFP46459 744 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 MARCKSL1P49006 195 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 CDC42EP1Q00587 391 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 SOX4Q06945 474 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 TAF2Q6P1X5 1199 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 MMS22LQ6ZRQ5 1243 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 PDCL2Q8N4E4 241 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF564Q8TBZ8 553 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 FAM81BQ96LP2 452 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 LPIN3Q9BQK8 851 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 NOD1Q9Y239 953 aa11.6□□□□□ -0.55
SNRPA1-211ENST00000560433 SNX9Q9Y5X1 595 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms