RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ARHGAP29Q52LW3 1261 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 NCAPH2Q6IBW4 605 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 SLC8B1Q6J4K2 584 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 POTEHQ6S545 545 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 MOXD1Q6UVY6 613 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 ZBTB8OSQ8IWT0 167 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 TCEAL8Q8IYN2 117 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 ZC3H10Q96K80 434 aaKnown RBP10.19□□□□□ -0.78
SMAD3-215ENST00000560424 PRIMPOLQ96LW4 560 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 UROC1Q96N76 676 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 MKNK1Q9BUB5 465 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 NFKBIZQ9BYH8 718 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 SCAND2PQ9GZW5 306 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-215ENST00000560424 ZSWIM4Q9H7M6 989 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 TRPV4Q9HBA0 871 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 PRMT7Q9NVM4 692 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-215ENST00000560424 C2orf42Q9NWW7 574 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 NEUROG3Q9Y4Z2 214 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 CYP3A7-CYP3A51PA0A087WV96 503 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 TMEM189-UBE2V1I3L0A0 370 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 I3L4J1 428 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 ARNTLO00327 626 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 TBX3O15119 743 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 HYAL3O43820 417 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-215ENST00000560424 DGAT1O75907 488 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 CYP3A7P24462 503 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 CLCNKBP51801 687 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 KRT85P78386 507 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 CYP4A11Q02928 519 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 GRSF1Q12849 480 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMAD3-215ENST00000560424 CCINQ13939 588 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 TRIM29Q14134 588 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 CTTNQ14247 550 aaKnown RBP10.18□□□□□ -0.78
SMAD3-215ENST00000560424 EPHA7Q15375 998 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 PLK5Q496M5 336 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 TXNDC11Q6PKC3 985 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 TPH2Q8IWU9 490 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 HS6ST3Q8IZP7 471 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 ASAP3Q8TDY4 903 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 FAM20AQ96MK3 541 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 FOXP1Q9H334 677 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-215ENST00000560424 LMBRD1Q9NUN5 540 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 GTSE1Q9NYZ3 720 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 WRAP73Q9P2S5 460 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-215ENST00000560424 CFAP45Q9UL16 551 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 PCDHA4Q9UN74 947 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 WASF3Q9UPY6 502 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 GDAQ9Y2T3 454 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 MSRB2Q9Y3D2 182 aa10.18□□□□□ -0.78
SMAD3-215ENST00000560424 MORC2Q9Y6X9 1032 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-215ENST00000560424 WDFY3Q8IZQ1 3526 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 LNP1A1A4G5 178 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 NRG2O14511 850 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-215ENST00000560424 EDIL3O43854 480 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 ABLIM3O94929 683 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 CPB1P15086 417 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 LIG1P18858 919 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 HOXC13P31276 330 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 BRCC3P46736 316 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 FCHO2Q0JRZ9 810 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 GLRA4Q5JXX5 417 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 TPGS2Q68CL5 300 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 GALNT17Q6IS24 598 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 APBB1IPQ7Z5R6 666 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-215ENST00000560424 CAMKK1Q8N5S9 505 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 DEFB124Q8NES8 71 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 DYDC2Q96IM9 177 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 TMEM209Q96SK2 561 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 POLR3FQ9H1D9 316 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-215ENST00000560424 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
SMAD3-215ENST00000560424 VAV3Q9UKW4 847 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 NUB1Q9Y5A7 615 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 ARID2Q68CP9 1835 aa10.17□□□□□ -0.78
SMAD3-215ENST00000560424 A0A1W2PRU2 124 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 BCLAF3A2AJT9 711 aaKnown RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 SLC37A4O43826 429 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ZIC2O95409 532 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 SEC24AO95486 1093 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 MBD3O95983 291 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 GLRA2P23416 452 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 AMPD2Q01433 879 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 PLD1Q13393 1074 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 PRPF4BQ13523 1007 aaKnown RBP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 SAFBQ15424 915 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMAD3-215ENST00000560424 MAPK6Q16659 721 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 UPP1Q16831 310 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 INF2Q27J81 1249 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 KLHL40Q2TBA0 621 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ITPRIPL2Q3MIP1 535 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 CTXN3Q4LDR2 81 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ARHGAP15Q53QZ3 475 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 ZNF280DQ6N043 979 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 C19orf48Q6RUI8 117 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 PPP4R3CPQ6ZMV5 832 aa10.16□□□□□ -0.78
SMAD3-215ENST00000560424 CYP2U1Q7Z449 544 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms