RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SLC44A4Q53GD3 710 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 PRSS36Q5K4E3 855 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 IQCEQ6IPM2 695 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 PDZD4Q76G19 769 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-214ENST00000560402 DDX12PQ92771 950 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 BICD1Q96G01 975 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 CALML4Q96GE6 196 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 ZBTB45Q96K62 511 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-214ENST00000560402 LTB4R2Q9NPC1 389 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 ZNF292O60281 2723 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 CACNA1IQ9P0X4 2223 aa14.76□□□□□ -0.05
SMAD3-214ENST00000560402 TTC26A0AVF1 554 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 M0QZQ0 153 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 NCAM2O15394 837 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 MEFVO15553 781 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-214ENST00000560402 SP9P0CG40 484 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 CXCL8P10145 99 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 CPB1P15086 417 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 PAX3P23760 479 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 MARCKSP29966 332 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-214ENST00000560402 LIG4P49917 911 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 ARPP19P56211 112 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 PLD1Q13393 1074 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 UBXN2BQ14CS0 331 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 ZNF528Q3MIS6 628 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 CYP4A22Q5TCH4 519 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 ST13P5Q8NFI4 369 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-214ENST00000560402 NELL2Q99435 816 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 CORO1BQ9BR76 489 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 TUBGCP4Q9UGJ1 667 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 FBXO4Q9UKT5 387 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 MRPS17Q9Y2R5 130 aaKnown RBP14.75□□□□□ -0.05
SMAD3-214ENST00000560402 ANK1P16157 1881 aa14.75□□□□□ -0.05
SMAD3-214ENST00000560402 NUP210Q8TEM1 1887 aaPredicted RBP14.75□□□□□ -0.05
SMAD3-214ENST00000560402 COL4A3Q01955 1670 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 TICRRQ7Z2Z1 1910 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 HNRNPDLO14979 420 aaKnown RBP14.74□□□□□ -0.05
SMAD3-214ENST00000560402 SPTLC1O15269 473 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 LAMTOR5O43504 91 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 GLULP15104 373 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 AARSP49588 968 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMAD3-214ENST00000560402 ZNF131P52739 623 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 EPHA5P54756 1037 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 YWHAHQ04917 246 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-214ENST00000560402 ADCY1Q08828 1119 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 TPRG1Q6ZUI0 275 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 HAUS6Q7Z4H7 955 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 GPBP1Q86WP2 473 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 CD302Q8IX05 232 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 KCNG4Q8TDN1 519 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 MCRS1Q96EZ8 462 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 KIF12Q96FN5 646 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 REEP2Q9BRK0 252 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 IER2Q9BTL4 223 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 ZFP14Q9HCL3 533 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 ASAH2Q9NR71 780 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 R4GN57 208 aa14.74□□□□□ -0.05
SMAD3-214ENST00000560402 OR6C75A6NL08 312 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 K7ENM7 598 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 OGTO15294 1046 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 KINO60870 393 aaKnown RBP14.73□□□□□ -0.05
SMAD3-214ENST00000560402 FAM13AO94988 1023 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 OAZ2O95190 189 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 SEC24AO95486 1093 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ADRB2P07550 413 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 FCARP24071 287 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 LONP1P36776 959 aaKnown RBP14.73□□□□□ -0.05
SMAD3-214ENST00000560402 UBA7P41226 1012 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 RPS9P46781 194 aaKnown RBP14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ZBTB6Q15916 424 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 SEZ6Q53EL9 994 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ARSHQ5FYA8 562 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ZBTB41Q5SVQ8 909 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ZNF852Q6ZMS4 543 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ERMP1Q7Z2K6 904 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 BEST2Q8NFU1 509 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 DEPDC1BQ8WUY9 529 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 LEO1Q8WVC0 666 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-214ENST00000560402 CHAMP1Q96JM3 812 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ZNF512Q96ME7 567 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-214ENST00000560402 ASB16Q96NS5 453 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 GRPEL1Q9HAV7 217 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 TRPV5Q9NQA5 729 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 SPATA6Q9NWH7 488 aaPredicted RBP14.73□□□□□ -0.05
SMAD3-214ENST00000560402 YIPF1Q9Y548 306 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 OTOGLQ3ZCN5 2332 aa14.73□□□□□ -0.05
SMAD3-214ENST00000560402 FAM170BA6NMN3 283 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 MAN2B1O00754 1011 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 FAM189A1O60320 539 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 TYMPP19971 482 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 TARSP26639 723 aaKnown RBP14.72□□□□□ -0.05
SMAD3-214ENST00000560402 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
SMAD3-214ENST00000560402 TWF1Q12792 350 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 MYBPC2Q14324 1141 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
SMAD3-214ENST00000560402 LRSAM1Q6UWE0 723 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 USP37Q86T82 979 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 MAP4K3Q8IVH8 894 aa14.72□□□□□ -0.05
SMAD3-214ENST00000560402 E2F7Q96AV8 911 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms