RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TTLL11Q8NHH1 800 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ATL2Q8NHH9 583 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM81AQ8TBF8 368 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ATP8B4Q8TF62 1192 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 EZH1Q92800 747 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 PPP1R14BQ96C90 147 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 PSMB7Q99436 277 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 SELENOSQ9BQE4 189 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 TIPINQ9BVW5 301 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 BRIP1Q9BX63 1249 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 TRIM4Q9C037 500 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 SMG9Q9H0W8 520 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 CARD9Q9H257 536 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 TNKS2Q9H2K2 1166 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 VCX3BQ9H321 246 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 SPC25Q9HBM1 224 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 VCX3AQ9NNX9 186 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 NLRC4Q9NPP4 1024 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 AVENQ9NQS1 362 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ZDHHC18Q9NUE0 388 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 TCP11L1Q9NUJ3 509 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ABCF3Q9NUQ8 709 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 USP40Q9NVE5 1235 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 LARSQ9P2J5 1176 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 PDP2Q9P2J9 529 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 MTRF1LQ9UGC7 380 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 PFDN2Q9UHV9 154 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNRF3Q9ULT6 936 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 AGAP1Q9UPQ3 857 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ACTL7BQ9Y614 415 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 SLC4A4Q9Y6R1 1079 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 SCN7AQ01118 1682 aa6.38□□□□□ -1.39
SNRPA1-209ENST00000560307 ZNF142P52746 1687 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PITPNM2Q9BZ72 1349 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CCDC194A0A1B0GVG4 234 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 DPPA5A6NC42 116 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PODXLO00592 558 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TRAFD1O14545 582 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 EPHB6O15197 1021 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 MARCH6O60337 910 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TLR2O60603 784 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PEX11AO75192 247 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 COQ9O75208 318 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TCEA3O75764 348 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PDE8BO95263 885 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PLEKHA8P1O95397 391 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 OR52Z1P0C646 297 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TPBGLP0DKB5 382 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PLCG1P19174 1290 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 SP100P23497 879 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PEX5P50542 639 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 HADHBP55084 474 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CABP4P57796 275 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 MRPS25P82663 173 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 KLHL30Q0D2K2 578 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 STK4Q13043 487 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TBC1D25Q3MII6 688 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 ZCWPW2Q504Y3 356 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 PLEKHG4Q58EX7 1191 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM133BQ5BKY9 247 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM83BQ5T0W9 1011 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 THEMIS2Q5TEJ8 643 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 NUGGCQ68CJ6 796 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TRMT10CQ7L0Y3 403 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 VPS36Q86VN1 386 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 KIRREL3Q8IZU9 778 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 REXO1Q8N1G1 1221 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 METTL13Q8N6R0 699 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 ENAHQ8N8S7 591 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CNBD1Q8NA66 436 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 RBBP8NLQ8NC74 664 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 B4GALNT2Q8NHY0 566 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CKAP2Q8WWK9 683 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 KIFAP3Q92845 792 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CALML4Q96GE6 196 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 HES6Q96HZ4 224 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 RBM41Q96IZ5 413 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 SERPINB12Q96P63 405 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 ERP44Q9BS26 406 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 SPZ1Q9BXG8 430 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 GANQ9H2C0 597 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TAOK3Q9H2K8 898 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 EPB41L4BQ9H329 900 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TLE6Q9H808 572 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 POLD4Q9HCU8 107 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 DMAP1Q9NPF5 467 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 FAM207AQ9NSI2 230 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 ATP8A2Q9NTI2 1148 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 IL1RAPL1Q9NZN1 696 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 STOML1Q9UBI4 398 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 SCOCQ9UIL1 159 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TMCO1Q9UM00 188 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 TRIM33Q9UPN9 1127 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 LRCH1Q9Y2L9 728 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 GMEB1Q9Y692 573 aa6.37□□□□□ -1.39
SNRPA1-209ENST00000560307 CACNA1SQ13698 1873 aa6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 CICQ96RK0 1608 aaPredicted RBP6.36□□□□□ -1.39
SNRPA1-209ENST00000560307 ROBO3Q96MS0 1386 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms