RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 DHCR24Q15392 516 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 MUM1L1Q5H9M0 696 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 COLGALT2Q8IYK4 626 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 GREM2Q9H772 168 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 IFT22Q9H7X7 185 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 UNKLQ9H9P5 680 aaKnown RBP4.73□□□□□ -1.65
LRRC28-218ENST00000560236 IFT122Q9HBG6 1241 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 LANCL2Q9NS86 450 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 RBM12Q9NTZ6 932 aaKnown RBP4.73□□□□□ -1.65
LRRC28-218ENST00000560236 KCTD5Q9NXV2 234 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 MAPRE3Q9UPY8 281 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 SETBP1Q9Y6X0 1596 aa4.73□□□□□ -1.65
LRRC28-218ENST00000560236 FGD6Q6ZV73 1430 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 ABCC1P33527 1531 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 FAM135AQ9P2D6 1515 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 A0A087X0B3 334 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 PROP1O75360 226 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 CKBP12277 381 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 MTHFD2P13995 350 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 GUCY1A2P33402 732 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 ID4P47928 161 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 MUM1Q2TAK8 710 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 AKNAD1Q5T1N1 836 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 OTUD7BQ6GQQ9 843 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 TTC1Q99614 292 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 ACE2Q9BYF1 805 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-218ENST00000560236 SLC29A3Q9BZD2 475 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 QRSL1Q9H0R6 528 aaKnown RBP4.72□□□□□ -1.65
LRRC28-218ENST00000560236 LDAHQ9H6V9 325 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 TMEM140Q9NV12 185 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 FBXO34Q9NWN3 711 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 ASB6Q9NWX5 421 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 RNF7Q9UBF6 113 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 AJAP1Q9UKB5 411 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-218ENST00000560236 MRPL42Q9Y6G3 142 aaKnown RBP4.72□□□□□ -1.65
LRRC28-218ENST00000560236 NLRP1Q9C000 1473 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 UGGT1Q9NYU2 1555 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 PREX2Q70Z35 1606 aa4.72□□□□□ -1.65
LRRC28-218ENST00000560236 PLXNC1O60486 1568 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 KRTAP29-1A8MX34 341 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-218ENST00000560236 PEX1O43933 1283 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 ZEB2O60315 1214 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 NOMO1Q15155 1222 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 MEX3CQ5U5Q3 659 aaKnown RBP4.71□□□□□ -1.66
LRRC28-218ENST00000560236 UBE3BQ7Z3V4 1068 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 KIAA0907Q7Z7F0 614 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-218ENST00000560236 LNX2Q8N448 690 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 TGFBRAP1Q8WUH2 860 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 SMG7Q92540 1137 aaKnown RBP4.71□□□□□ -1.66
LRRC28-218ENST00000560236 HOXB13Q92826 284 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-218ENST00000560236 MARS2Q96GW9 593 aaKnown RBP4.71□□□□□ -1.66
LRRC28-218ENST00000560236 DMRT3Q9NQL9 472 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 IL17RBQ9NRM6 502 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 SLC23A1Q9UHI7 598 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 SCOCQ9UIL1 159 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 ZBTB21Q9ULJ3 1066 aa4.71□□□□□ -1.66
LRRC28-218ENST00000560236 PRXQ9BXM0 1461 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 GOLGA8AA7E2F4 631 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 TEX33O43247 280 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 ALAS1P13196 640 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 ITGB6P18564 788 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 FPR1P21462 350 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 SRSF4Q08170 494 aaKnown RBP4.7□□□□□ -1.66
LRRC28-218ENST00000560236 GEN1Q17RS7 908 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 SEM1Q6ZVN7 128 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 DDX46Q7L014 1031 aaKnown RBP4.7□□□□□ -1.66
LRRC28-218ENST00000560236 CASKIN2Q8WXE0 1202 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 ANKS1AQ92625 1134 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 MYOCQ99972 504 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 ADI1Q9BV57 179 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 KMT5AQ9NQR1 393 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 ARPP21Q9UBL0 812 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-218ENST00000560236 COL16A1Q07092 1604 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-218ENST00000560236 ATP7AQ04656 1500 aa4.7□□□□□ -1.66
LRRC28-218ENST00000560236 CDC42BPAQ5VT25 1732 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 TNRQ92752 1358 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 ABCC3O15438 1527 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 TRGV11A0A075B6L2 103 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 ENDOD1O94919 500 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 FOLR3P41439 243 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 RBM6P78332 1123 aaKnown RBP4.69□□□□□ -1.66
LRRC28-218ENST00000560236 PPP3CAQ08209 521 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 MICALCLQ6ZW33 695 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 BHLHA9Q7RTU4 235 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 GRASPQ7Z6J2 395 aaPredicted RBP4.69□□□□□ -1.66
LRRC28-218ENST00000560236 CMIPQ8IY22 773 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 SH2D3CQ8N5H7 860 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 FITM2Q8N6M3 262 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 SSH3Q8TE77 659 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 SCARB1Q8WTV0 552 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 NUP133Q8WUM0 1156 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 UROC1Q96N76 676 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 MED15Q96RN5 788 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 PNKPQ96T60 521 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 HSFX1Q9UBD0 423 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 APOBEC2Q9Y235 224 aaKnown RBP4.69□□□□□ -1.66
LRRC28-218ENST00000560236 ACTL7AQ9Y615 435 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 SRCAPQ6ZRS2 3230 aa4.69□□□□□ -1.66
LRRC28-218ENST00000560236 SAMD9LQ8IVG5 1584 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms