RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CTCFP49711 727 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 MAPK6Q16659 721 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 CAMKK2Q96RR4 588 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 OSBPL8Q9BZF1 889 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 ALG13Q9NP73 1137 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 XPO7Q9UIA9 1087 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 SLC1A1P43005 524 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 BTBD8Q5XKL5 378 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 PTRHD1Q6GMV3 140 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 CHAMP1Q96JM3 812 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 S100A6P06703 90 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 HSMCR30P0CW71 290 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 EPB42P16452 691 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 GUCY1A2P33402 732 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 USP10Q14694 798 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 CYP51A1Q16850 503 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 OTUD7AQ8TE49 926 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 GSTM1P09488 218 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 SCNN1DP51172 638 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 CBFBQ13951 182 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF394Q53GI3 561 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 ANKMY2Q8IV38 441 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 PCSK1NQ9UHG2 260 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 GTF2E2P29084 291 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 S100GP29377 79 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 KYNUQ16719 465 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 LRIG3Q6UXM1 1119 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 TMC4Q7Z404 712 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 RCOR2Q8IZ40 523 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 FAM129BQ96TA1 746 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 LATS2Q9NRM7 1088 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 STK39Q9UEW8 545 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 LCA5LO95447 670 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 FGAP02671 866 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 CHN1P15882 459 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 RIBC1Q8N443 379 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 SEC16BQ96JE7 1060 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 WWP2O00308 870 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 STARP49675 285 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 BYSLQ13895 437 aaKnown RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 CRYMQ14894 314 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 C2orf40Q9H1Z8 148 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 PLEKHA5Q9HAU0 1116 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 TRPM5Q9NZQ8 1165 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 FAM47DPA6NHR8 397 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 ABCB1P08183 1280 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 CDH6P55285 790 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 MRPS25P82663 173 aaKnown RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 FBXW10Q5XX13 1052 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 TYW3Q6IPR3 259 aaKnown RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 SVOPQ8N4V2 548 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 KCTD17Q8N5Z5 321 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 SH3BP4Q9P0V3 963 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 PNMA3Q9UL41 463 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 CUL7Q14999 1698 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 HPGDP15428 266 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARF5P84085 180 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 FAM102AQ5T9C2 384 aaPredicted RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 TWF2Q6IBS0 349 aaKnown RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZCCHC8Q6NZY4 707 aaKnown RBP14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 MIEF2Q96C03 454 aa14.46□□□□□ -0.09
CSPG4P12-202ENST00000559989 BCL10O95999 233 aa14.46□□□□□ -0.1
CSPG4P12-202ENST00000559989 STAT5AP42229 794 aa14.46□□□□□ -0.1
CSPG4P12-202ENST00000559989 STAT5BP51692 787 aa14.46□□□□□ -0.1
CSPG4P12-202ENST00000559989 BMP3P12645 472 aa14.46□□□□□ -0.1
CSPG4P12-202ENST00000559989 SLC9A7Q96T83 725 aa14.46□□□□□ -0.1
CSPG4P12-202ENST00000559989 S100A13Q99584 98 aa14.46□□□□□ -0.1
CSPG4P12-202ENST00000559989 IFNA14P01570 189 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 PSMD4P55036 377 aaKnown RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 STX5Q13190 355 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 ARMCX6Q7L4S7 300 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 OTOAQ7RTW8 1153 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 GDAQ9Y2T3 454 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 CDK13Q14004 1512 aaKnown RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 KIAA0408Q6ZU52 694 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 SPICE1Q8N0Z3 855 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 ATPAF2Q8N5M1 289 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 ANKRD27Q96NW4 1050 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 EFCAB10A6NFE3 127 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 PSMD14O00487 310 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 MZF1P28698 734 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 COPAP53621 1224 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 NRG3P56975 720 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 GRAMD1CQ8IYS0 662 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 SLC30A1Q9Y6M5 507 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 UBN2Q6ZU65 1347 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 CCDC166P0CW27 439 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 VAMP7P51809 220 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 CDC16Q13042 620 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 HS6ST3Q8IZP7 471 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 FAM9CQ8IZT9 166 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 MCPH1Q8NEM0 835 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 ATL2Q8NHH9 583 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 KLHL4Q9C0H6 718 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 ARF4P18085 180 aaPredicted RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 PTK6Q13882 451 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 SGO1Q5FBB7 561 aa14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 ARL6IP4Q66PJ3 421 aaKnown RBP14.45□□□□□ -0.1
CSPG4P12-202ENST00000559989 TRIM48Q8IWZ4 208 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms