RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 SNX21Q969T3 373 aa19.26■□□□□ 0.67
HDDC3-205ENST00000559898 SAAL1Q96ER3 474 aa19.26■□□□□ 0.67
HDDC3-205ENST00000559898 CHAMP1Q96JM3 812 aa19.26■□□□□ 0.67
HDDC3-205ENST00000559898 CORO1BQ9BR76 489 aa19.26■□□□□ 0.67
HDDC3-205ENST00000559898 AGO2Q9UKV8 859 aaKnown RBP19.26■□□□□ 0.67
HDDC3-205ENST00000559898 DMDP11532 3685 aa19.26■□□□□ 0.67
HDDC3-205ENST00000559898 H7C4K7 107 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 PRRG1O14668 218 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 GALR2O43603 387 aaPredicted RBP19.25■□□□□ 0.67
HDDC3-205ENST00000559898 LRRN2O75325 713 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 MOSPD3O75425 235 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 POU2F2P09086 479 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 IDEP14735 1019 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 GJA1P17302 382 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 STAT6P42226 847 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 LILRA4P59901 499 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 STK38Q15208 465 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 E2F4Q16254 413 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 ZNF280DQ6N043 979 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 TCEAL8Q8IYN2 117 aa19.25■□□□□ 0.67
HDDC3-205ENST00000559898 ZSCAN16Q9H4T2 348 aaPredicted RBP19.25■□□□□ 0.67
HDDC3-205ENST00000559898 MRPL44Q9H9J2 332 aaKnown RBP19.25■□□□□ 0.67
HDDC3-205ENST00000559898 DAXXQ9UER7 740 aaPredicted RBP19.25■□□□□ 0.67
HDDC3-205ENST00000559898 MORC2Q9Y6X9 1032 aaPredicted RBP19.25■□□□□ 0.67
HDDC3-205ENST00000559898 FRMD3A2A2Y4 597 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 GOLGA8IPA6NC78 632 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 GOLGA8JA6NMD2 632 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 SOAT2O75908 522 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 PRPF6O94906 941 aaKnown RBP19.24■□□□□ 0.67
HDDC3-205ENST00000559898 CPB1P15086 417 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 AOC1P19801 751 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 CASP1P29466 404 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 TWF1Q12792 350 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 TMEM132DQ14C87 1099 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 L1TD1Q5T7N2 865 aaKnown RBP19.24■□□□□ 0.67
HDDC3-205ENST00000559898 SHC4Q6S5L8 630 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 DSTYKQ6XUX3 929 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 SENP8Q96LD8 212 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 ZSWIM3Q96MP5 696 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 WNT16Q9UBV4 365 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 MRPS23Q9Y3D9 190 aaKnown RBP19.24■□□□□ 0.67
HDDC3-205ENST00000559898 NCANO14594 1321 aa19.24■□□□□ 0.67
HDDC3-205ENST00000559898 ANO9A1A5B4 782 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
HDDC3-205ENST00000559898 PIRO00625 290 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 SPTLC2O15270 562 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 OAZ2O95190 189 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 GCNT3O95395 438 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 LRG1P02750 347 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 ELF1P32519 619 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 CLCN5P51795 746 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 YWHAHQ04917 246 aaPredicted RBP19.23■□□□□ 0.67
HDDC3-205ENST00000559898 TANGO2Q6ICL3 276 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 APPL2Q8NEU8 664 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 BEST2Q8NFU1 509 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 OR10T2Q8NGX3 314 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 POMGNT1Q8WZA1 660 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 ATOH1Q92858 354 aaPredicted RBP19.23■□□□□ 0.67
HDDC3-205ENST00000559898 RTP3Q9BQQ7 232 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 CBWD1Q9BRT8 395 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 FOXQ1Q9C009 403 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 DNAJC25Q9H1X3 360 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 PCIF1Q9H4Z3 704 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 TBC1D17Q9HA65 648 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 PANK4Q9NVE7 773 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 AFF4Q9UHB7 1163 aaKnown RBP19.23■□□□□ 0.67
HDDC3-205ENST00000559898 SLC27A5Q9Y2P5 690 aa19.23■□□□□ 0.67
HDDC3-205ENST00000559898 PTPN2P17706 415 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 FCARP24071 287 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 HOXD13P35453 343 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 TXLNAP40222 546 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 NXPE3Q969Y0 559 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 BORCS6Q96GS4 357 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 FAM213AQ9BRX8 229 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 YIPF1Q9Y548 306 aa19.22■□□□□ 0.67
HDDC3-205ENST00000559898 STK25O00506 426 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 DCNP07585 359 aaKnown RBP19.21■□□□□ 0.67
HDDC3-205ENST00000559898 COL4A2P08572 1712 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 GLULP15104 373 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 GAP43P17677 238 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 DUSP4Q13115 394 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 SNW1Q13573 536 aaKnown RBP19.21■□□□□ 0.67
HDDC3-205ENST00000559898 KYAT1Q16773 422 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 TPGS2Q68CL5 300 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 OVOS1Q6IE37 1185 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 ATAD1Q8NBU5 361 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 DHX58Q96C10 678 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 ACCSQ96QU6 501 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 LRRC3Q9BY71 257 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 ARHGEF3Q9NR81 526 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 SLC2A4RGQ9NR83 387 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 DPP3Q9NY33 737 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 KCNH3Q9ULD8 1083 aa19.21■□□□□ 0.67
HDDC3-205ENST00000559898 MTF2Q9Y483 593 aaPredicted RBP19.21■□□□□ 0.67
HDDC3-205ENST00000559898 VPS13AQ96RL7 3174 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 MTMR11A4FU01 709 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 F13A1P00488 732 aa19.2■□□□□ 0.66
HDDC3-205ENST00000559898 MYL4P12829 197 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms