RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 POTEHQ6S545 545 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 DSTYKQ6XUX3 929 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 RNF19BQ6ZMZ0 732 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 MFSD6LQ8IWD5 586 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 YAF2Q8IY57 180 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 HS6ST3Q8IZP7 471 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 CELF5Q8N6W0 485 aaKnown RBP9.99□□□□□ -0.81
HDDC3-204ENST00000559834 TMEM161BQ8NDZ6 487 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 ZSCAN18Q8TBC5 510 aaPredicted RBP9.99□□□□□ -0.81
HDDC3-204ENST00000559834 CSGALNACT1Q8TDX6 532 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 KIF12Q96FN5 646 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 BICD1Q96G01 975 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 MSANTD3Q96H12 275 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 CDK5RAP3Q96JB5 506 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 ZSWIM3Q96MP5 696 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
HDDC3-204ENST00000559834 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 SLITRK6Q9H5Y7 841 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.99□□□□□ -0.81
HDDC3-204ENST00000559834 CEP72Q9P209 647 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 UBQLN1Q9UMX0 589 aaKnown RBP9.99□□□□□ -0.81
HDDC3-204ENST00000559834 PIAS3Q9Y6X2 628 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 MIA3Q5JRA6 1907 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 TRIP11Q15643 1979 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 USP34Q70CQ2 3546 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 FANCMQ8IYD8 2048 aa9.99□□□□□ -0.81
HDDC3-204ENST00000559834 OTOGLQ3ZCN5 2332 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 MED19A0JLT2 244 aaPredicted RBP9.98□□□□□ -0.81
HDDC3-204ENST00000559834 SHISA7A6NL88 538 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 DPYSL4O14531 572 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 SEC24BO95487 1268 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 FGF19O95750 216 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 MAPTP10636 758 aaKnown RBP9.98□□□□□ -0.81
HDDC3-204ENST00000559834 LRPAP1P30533 357 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 VIPR2P41587 438 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 CXCL12P48061 93 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 PPP2R3AQ06190 1150 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 RAD51AP2Q09MP3 1159 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 GPR17Q13304 367 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 TEAD2Q15562 447 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 ZBTB6Q15916 424 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 IL17AQ16552 155 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 SEZ6Q53EL9 994 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 HYIQ5T013 277 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 ARMCX5Q6P1M9 558 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 VITQ6UXI7 678 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 KCNK18Q7Z418 384 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 HAUS6Q7Z4H7 955 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 CD302Q8IX05 232 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 BEST2Q8NFU1 509 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 C8orf33Q9H7E9 229 aaPredicted RBP9.98□□□□□ -0.81
HDDC3-204ENST00000559834 RPF1Q9H9Y2 349 aaKnown RBP9.98□□□□□ -0.81
HDDC3-204ENST00000559834 CDV3Q9UKY7 258 aaKnown RBP9.98□□□□□ -0.81
HDDC3-204ENST00000559834 SMG5Q9UPR3 1016 aaKnown RBP9.98□□□□□ -0.81
HDDC3-204ENST00000559834 ASB3Q9Y575 518 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 F5P12259 2224 aa9.98□□□□□ -0.81
HDDC3-204ENST00000559834 TTC26A0AVF1 554 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 HEPACAM2A8MVW5 462 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 CHADO15335 359 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 MEFVO15553 781 aaPredicted RBP9.97□□□□□ -0.81
HDDC3-204ENST00000559834 SLC26A4O43511 780 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 MOSPD3O75425 235 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 PLA2G4BP0C869 781 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 CXCL8P10145 99 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 GJA1P17302 382 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 TYMPP19971 482 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 CCNE1P24864 410 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 ABCD1P33897 745 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 LIG4P49917 911 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 KPNA1P52294 538 aaPredicted RBP9.97□□□□□ -0.81
HDDC3-204ENST00000559834 SLC12A3P55017 1021 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 ATP2C1P98194 919 aaPredicted RBP9.97□□□□□ -0.81
HDDC3-204ENST00000559834 DUSP4Q13115 394 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 MYBPC2Q14324 1141 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 LRRC32Q14392 662 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 ARL6IP4Q66PJ3 421 aaKnown RBP9.97□□□□□ -0.81
HDDC3-204ENST00000559834 OVOS1Q6IE37 1185 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 ITIH5Q86UX2 942 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 SPEM1Q8N4L4 309 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 FAM200AQ8TCP9 573 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 KCNN1Q92952 543 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 PGLYRP2Q96PD5 576 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 PLIN2Q99541 437 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 HSFX1Q9UBD0 423 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 ODF2LQ9ULJ1 636 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 USP18Q9UMW8 372 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 YIPF1Q9Y548 306 aa9.97□□□□□ -0.81
HDDC3-204ENST00000559834 TIMM13Q9Y5L4 95 aaPredicted RBP9.97□□□□□ -0.81
HDDC3-204ENST00000559834 A0A1W2PRU2 124 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 VWA3AA6NCI4 1184 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 LACTBL1A8MY62 500 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 OGTO15294 1046 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 CHRNB1P11230 501 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 CNR2P34972 360 aa9.96□□□□□ -0.82
HDDC3-204ENST00000559834 TUFMP49411 452 aaKnown RBP9.96□□□□□ -0.82
HDDC3-204ENST00000559834 AARSP49588 968 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDDC3-204ENST00000559834 ATXN1P54253 815 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms