RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RAB24Q969Q5 203 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 VOPP1Q96AW1 172 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 GPATCH3Q96I76 525 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 MRGPRX4Q96LA9 322 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 SLC13A1Q9BZW2 595 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 R3HDMLQ9H3Y0 253 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 RSAD1Q9HA92 442 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 KIAA1586Q9HCI6 787 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 INTS13Q9NVM9 706 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 LIMCH1Q9UPQ0 1083 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 CDYLQ9Y232 598 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 SPEF1Q9Y4P9 236 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 PCDHGA9Q9Y5G4 932 aaKnown RBP4.89□□□□□ -1.63
SPG11-218ENST00000559754 PCDHGA8Q9Y5G5 932 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 PCDHGA7Q9Y5G6 932 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 PCDHGA6Q9Y5G7 932 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 PCDHGA3Q9Y5H0 932 aa4.89□□□□□ -1.63
SPG11-218ENST00000559754 hCG_2014768A0A024R1R8 64 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 CCDC195A0A1B0GUA6 201 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 CCDC151A5D8V7 595 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 FZD9O00144 591 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 MASP2O00187 686 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 KATNA1O75449 491 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 C1RP00736 705 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 CD1AP06126 327 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 SRGNP10124 158 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 CCND1P24385 295 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 SLC6A4P31645 630 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 CACNA2D1P54289 1103 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 ZNF280AP59817 542 aaPredicted RBP4.88□□□□□ -1.63
SPG11-218ENST00000559754 AMPD3Q01432 767 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 FPGSQ05932 587 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPG11-218ENST00000559754 UAP1L1Q3KQV9 507 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 C3orf36Q3SXR2 165 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 PRPF38AQ8NAV1 312 aaKnown RBP4.88□□□□□ -1.63
SPG11-218ENST00000559754 PDLIM2Q96JY6 352 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 CCDC8Q9H0W5 538 aaPredicted RBP4.88□□□□□ -1.63
SPG11-218ENST00000559754 ADARB2Q9NS39 739 aaKnown RBP4.88□□□□□ -1.63
SPG11-218ENST00000559754 GNL3LQ9NVN8 582 aaKnown RBP4.88□□□□□ -1.63
SPG11-218ENST00000559754 FOXJ2Q9P0K8 574 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 SLC17A6Q9P2U8 582 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 ARID4BQ4LE39 1312 aaPredicted RBP4.88□□□□□ -1.63
SPG11-218ENST00000559754 SALL3Q9BXA9 1300 aa4.88□□□□□ -1.63
SPG11-218ENST00000559754 ZFPL1O95159 310 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 SBK3P0C264 359 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 EDNRBP24530 442 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 ANXA11P50995 505 aaKnown RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 C21orf58P58505 322 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 SF3B3Q15393 1217 aaKnown RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 PTPN21Q16825 1174 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 NBPF8Q3BBV2 869 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 PREPLQ4J6C6 727 aaPredicted RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 GRASPQ7Z6J2 395 aaPredicted RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 MIER2Q8N344 545 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 NSUN6Q8TEA1 469 aaKnown RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 TMEM125Q96AQ2 219 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 KLHL32Q96NJ5 620 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 TLR10Q9BXR5 811 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 ALG13Q9NP73 1137 aaKnown RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 SIDT1Q9NXL6 827 aaKnown RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 POLHQ9Y253 713 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 NOP58Q9Y2X3 529 aaKnown RBP4.87□□□□□ -1.63
SPG11-218ENST00000559754 PCDHB1Q9Y5F3 818 aa4.87□□□□□ -1.63
SPG11-218ENST00000559754 E7ENX8 843 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 TOR1BO14657 336 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 YY2O15391 372 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 MPPED1O15442 326 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 ARIH2O95376 493 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 GNAI3P08754 354 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 CYP2C19P33261 490 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 ANAPC15P60006 121 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 GNAI1P63096 354 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 POU6F2P78424 691 aaPredicted RBP4.86□□□□□ -1.63
SPG11-218ENST00000559754 TAP2Q03519 686 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 DYRK1AQ13627 763 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 FAM50AQ14320 339 aaKnown RBP4.86□□□□□ -1.63
SPG11-218ENST00000559754 HLXQ14774 488 aaPredicted RBP4.86□□□□□ -1.63
SPG11-218ENST00000559754 THEMIS2Q5TEJ8 643 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 KIAA0895LQ68EN5 471 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 PDSS2Q86YH6 399 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 FAM98AQ8NCA5 519 aaKnown RBP4.86□□□□□ -1.63
SPG11-218ENST00000559754 SNX19Q92543 992 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 KAT5Q92993 513 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 PGBD1Q96JS3 809 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 SMOQ99835 787 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 IMPG2Q9BZV3 1241 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 PRDM13Q9H4Q3 707 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 SEMA4GQ9NTN9 838 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 RLIMQ9NVW2 624 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 CTTNBP2NLQ9P2B4 639 aa4.86□□□□□ -1.63
SPG11-218ENST00000559754 PROM1O43490 865 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 DTNBO60941 627 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 IGLV2-14P01704 120 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 FTH1P19P0C7X4 201 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 MALP21145 153 aa4.85□□□□□ -1.63
SPG11-218ENST00000559754 SMARCA1P28370 1054 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms