RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 MCM6Q14566 821 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 FAM78AQ5JUQ0 283 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 TPGS2Q68CL5 300 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 TPRG1Q6ZUI0 275 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 KCTD17Q8N5Z5 321 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 APPL2Q8NEU8 664 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 ZSWIM3Q96MP5 696 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 PLEKHA5Q9HAU0 1116 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 LTB4R2Q9NPC1 389 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 LARSQ9P2J5 1176 aaKnown RBP12.67□□□□□ -0.38
USP3-214ENST00000559718 AFF4Q9UHB7 1163 aaKnown RBP12.67□□□□□ -0.38
USP3-214ENST00000559718 KCNG1Q9UIX4 513 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 TBX20Q9UMR3 447 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 EP300Q09472 2414 aaPredicted RBP12.67□□□□□ -0.38
USP3-214ENST00000559718 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
USP3-214ENST00000559718 SHISA7A6NL88 538 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 K7ENM7 598 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 M0QZQ0 153 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 MOSPD3O75425 235 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 FAM13AO94988 1023 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 LMNAP02545 664 aaKnown RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 CPB1P15086 417 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 PLCG1P19174 1290 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 TARSP26639 723 aaKnown RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 MARCKSP29966 332 aaPredicted RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 UBA7P41226 1012 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 KARSQ15046 597 aaKnown RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 ENOX2Q16206 610 aaKnown RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 LARP1BQ659C4 914 aaKnown RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 SLC39A4Q6P5W5 647 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 PDZD4Q76G19 769 aaPredicted RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 MYCT1Q8N699 235 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 AK8Q96MA6 479 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 PGLYRP2Q96PD5 576 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 CRISPLD1Q9H336 500 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 HEBP1Q9NRV9 189 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 SPATA6Q9NWH7 488 aaPredicted RBP12.66□□□□□ -0.38
USP3-214ENST00000559718 ODF2LQ9ULJ1 636 aa12.66□□□□□ -0.38
USP3-214ENST00000559718 NCANO14594 1321 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 SPTBN4Q9H254 2564 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 A0A0B4J269 797 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 H0YCG3 227 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 ZNF197O14709 1029 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 HNRNPDLO14979 420 aaKnown RBP12.65□□□□□ -0.38
USP3-214ENST00000559718 OAZ2O95190 189 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 PIGRP01833 764 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 MYL4P12829 197 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 NMT1P30419 496 aaKnown RBP12.65□□□□□ -0.38
USP3-214ENST00000559718 AARSP49588 968 aaKnown RBP eCLIP12.65□□□□□ -0.38
USP3-214ENST00000559718 ZNF131P52739 623 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
USP3-214ENST00000559718 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 KCNN1Q92952 543 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 CALML4Q96GE6 196 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 ZNF512Q96ME7 567 aaPredicted RBP12.65□□□□□ -0.38
USP3-214ENST00000559718 ASB16Q96NS5 453 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 TMEM209Q96SK2 561 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 FIZ1Q96SL8 496 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 BCO2Q9BYV7 579 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 ZHX3Q9H4I2 956 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 RPF1Q9H9Y2 349 aaKnown RBP12.65□□□□□ -0.38
USP3-214ENST00000559718 PARVGQ9HBI0 331 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 ZFP14Q9HCL3 533 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 UBQLN1Q9UMX0 589 aaKnown RBP12.65□□□□□ -0.38
USP3-214ENST00000559718 YIPF1Q9Y548 306 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 FANCMQ8IYD8 2048 aa12.65□□□□□ -0.38
USP3-214ENST00000559718 F5P12259 2224 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 TISP43B9A030 160 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 ANKRD63C9JTQ0 380 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 SPTLC1O15269 473 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 OGTO15294 1046 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 TRAK2O60296 914 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 MICAL2O94851 1124 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 ADRB2P07550 413 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 NFICP08651 508 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 CYP3A5P20815 502 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 VIPR2P41587 438 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 CDR1P51861 262 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 DUSP4Q13115 394 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 FZD5Q13467 585 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 SF3A1Q15459 793 aaKnown RBP12.64□□□□□ -0.39
USP3-214ENST00000559718 TEAD2Q15562 447 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 ZC2HC1CQ53FD0 456 aaPredicted RBP12.64□□□□□ -0.39
USP3-214ENST00000559718 CYP4A22Q5TCH4 519 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 JADE1Q6IE81 842 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 IQCEQ6IPM2 695 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 VITQ6UXI7 678 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 DSTYKQ6XUX3 929 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 USP49Q70CQ1 688 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 ELMOD1Q8N336 334 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
USP3-214ENST00000559718 BEST2Q8NFU1 509 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms