RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ORC1Q13415 861 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 TAF3Q5VWG9 929 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 NT5DC4Q86YG4 428 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 EPS8L1Q8TE68 723 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 PAAF1Q9BRP4 392 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 RSAD1Q9HA92 442 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 UBQLN1Q9UMX0 589 aaKnown RBP18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 INPP5FQ9Y2H2 1132 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 DAAM1Q9Y4D1 1078 aa18.58■□□□□ 0.57
CHRNA3-206ENST00000559658 DDX3XO00571 662 aaKnown RBP eCLIP18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 B4GALT3O60512 393 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 POMCP01189 267 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 CLTBP09497 229 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 FGFR1P11362 822 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 RAB27AP51159 221 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 TMEM270Q6UE05 265 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 GLYCTKQ8IVS8 523 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 BEST2Q8NFU1 509 aa18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 TSPYL2Q9H2G4 693 aaPredicted RBP18.58■□□□□ 0.56
CHRNA3-206ENST00000559658 ANO9A1A5B4 782 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 TRIM43BA6NCK2 446 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 EIF3CLB5ME19 914 aaKnown RBP18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 CCDC175P0C221 793 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 CHRNB2P17787 502 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 SSTR3P32745 418 aaPredicted RBP18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 RBP5P82980 135 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 ZNF394Q53GI3 561 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 ZNF667Q5HYK9 610 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 CLLU1OSQ5K130 101 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 CCDC170Q8IYT3 715 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 TRIM43Q96BQ3 446 aaPredicted RBP18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 EIF3CQ99613 913 aaKnown RBP18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 PACSIN1Q9BY11 444 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 BCO2Q9BYV7 579 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 LZTFL1Q9NQ48 299 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 PRDM10Q9NQV6 1147 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 CISHQ9NSE2 258 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 TMEM39AQ9NV64 488 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 PCDHB4Q9Y5E5 795 aa18.57■□□□□ 0.56
CHRNA3-206ENST00000559658 PIRO00625 290 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 CFHP08603 1231 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 CYLC1P35663 651 aaPredicted RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 ARHGAP25P42331 645 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 GATMP50440 423 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 ENOSF1Q7L5Y1 443 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 NECAB2Q7Z6G3 386 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 RBBP8NLQ8NC74 664 aaPredicted RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 C3orf58Q8NDZ4 430 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 TWNKQ96RR1 684 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 RPS6KC1Q96S38 1066 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 IRX2Q9BZI1 471 aaPredicted RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 LACRTQ9GZZ8 138 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 PRDM5Q9NQX1 630 aaPredicted RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 KCND1Q9NSA2 647 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 TAS2R14Q9NYV8 317 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 NENFQ9UMX5 172 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 GIT1Q9Y2X7 761 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 CASTOR2A6NHX0 329 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 F8W810 466 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 HCRTO43612 131 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 LCA5LO95447 670 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 CYP11B1P15538 503 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 TBXAS1P24557 533 aaPredicted RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 SLC18A3Q16572 532 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 SLC24A5Q71RS6 500 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 UBE2Q1Q7Z7E8 422 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 PCDHB18PQ96TA0 734 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 ZSWIM1Q9BR11 485 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 VRTNQ9H8Y1 702 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 NME7Q9Y5B8 376 aa18.56■□□□□ 0.56
CHRNA3-206ENST00000559658 ENPP3O14638 875 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 OFD1O75665 1012 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 CXCL10P02778 98 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 MMEP08473 750 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 ZNF132P52740 706 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 HACE1Q8IYU2 909 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 RPUSD2Q8IZ73 545 aaKnown RBP18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 SLC30A5Q8TAD4 765 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 CNTN6Q9UQ52 1028 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 SNX9Q9Y5X1 595 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 DUSP10Q9Y6W6 482 aa18.55■□□□□ 0.56
CHRNA3-206ENST00000559658 FANCGO15287 622 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 ATICP31939 592 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 CLCNKBP51801 687 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 FAM189BP81408 668 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 FMO1Q01740 532 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 WHAMMQ8TF30 809 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 SEPT8Q92599 483 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 TAF4BQ92750 862 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 AGPAT1Q99943 283 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 HCSTQ9UBK5 93 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 TTC3P53804 2025 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 LTBP2Q14767 1821 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 TSC2P49815 1807 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
CHRNA3-206ENST00000559658 THP07101 528 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms