RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CGRRF1Q99675 332 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.21■□□□□ 0.83
CASC4-209ENST00000559222 HOOK1Q9UJC3 728 aaKnown RBP20.21■□□□□ 0.83
CASC4-209ENST00000559222 AGAP1Q9UPQ3 857 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 SSX2IPQ9Y2D8 614 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 CDY1Q9Y6F8 540 aa20.21■□□□□ 0.83
CASC4-209ENST00000559222 LRRIQ3A6PVS8 624 aaPredicted RBP20.2■□□□□ 0.82
CASC4-209ENST00000559222 CALUO43852 315 aaPredicted RBP20.2■□□□□ 0.82
CASC4-209ENST00000559222 TBC1D4O60343 1298 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 AKAP3O75969 853 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 NR2F2P24468 414 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 OR1D2P34982 312 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 MORC3Q14149 939 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 MRPL58Q14197 206 aaKnown RBP20.2■□□□□ 0.82
CASC4-209ENST00000559222 COBLL1Q53SF7 1204 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 TJAP1Q5JTD0 557 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 RARS2Q5T160 578 aaKnown RBP20.2■□□□□ 0.82
CASC4-209ENST00000559222 LILRA6Q6PI73 481 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 DSTYKQ6XUX3 929 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 WDR49Q8IV35 697 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 GPR65Q8IYL9 337 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 ADSSL1Q8N142 457 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 GPT2Q8TD30 523 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 ELMO3Q96BJ8 720 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 CLSTN2Q9H4D0 955 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 USP15Q9Y4E8 981 aaPredicted RBP20.2■□□□□ 0.82
CASC4-209ENST00000559222 C5orf42Q9H799 3197 aa20.2■□□□□ 0.82
CASC4-209ENST00000559222 SYN3O14994 580 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 GLUD1P00367 558 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 KRT19P08727 400 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 TAF6P49848 677 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 SMAD4Q13485 552 aaKnown RBP20.19■□□□□ 0.82
CASC4-209ENST00000559222 C1orf220Q5T0J3 134 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 CSGALNACT2Q8N6G5 542 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 TMEM174Q8WUU8 243 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 ANKRD36BP1Q96IX9 119 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 GBP4Q96PP9 640 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 TMEM209Q96SK2 561 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
CASC4-209ENST00000559222 PPP1R3GB7ZBB8 358 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 RFPL2O75678 378 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 KIF20AO95235 890 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 OR4Q2P0C623 313 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 CDR1P51861 262 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 ARPP19P56211 112 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 BFSP1Q12934 665 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 NFIL3Q16649 462 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 AAK1Q2M2I8 961 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 CENPPQ6IPU0 288 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 ANKS3Q6ZW76 656 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 TRAPPC11Q7Z392 1133 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 PARD3BQ8TEW8 1205 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 ITGA11Q9UKX5 1188 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 BACE2Q9Y5Z0 518 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 DOCK6Q96HP0 2047 aa20.18■□□□□ 0.82
CASC4-209ENST00000559222 FSD2A1L4K1 749 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 WDR27A2RRH5 827 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 CST3P01034 146 aaPredicted RBP20.17■□□□□ 0.82
CASC4-209ENST00000559222 TNNC2P02585 160 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 TNNI1P19237 187 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 ROR1Q01973 937 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 SURF1Q15526 300 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 CTXN3Q4LDR2 81 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 TDRD10Q5VZ19 366 aaKnown RBP20.17■□□□□ 0.82
CASC4-209ENST00000559222 KLHL10Q6JEL2 608 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 TMC5Q6UXY8 1006 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 ADAMTS19Q8TE59 1207 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 CACTINQ8WUQ7 758 aaKnown RBP20.17■□□□□ 0.82
CASC4-209ENST00000559222 FNBP1Q96RU3 617 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 KIAA1468Q9P260 1216 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 FBXW11Q9UKB1 542 aa20.17■□□□□ 0.82
CASC4-209ENST00000559222 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.17■□□□□ 0.82
CASC4-209ENST00000559222 KPNA7A9QM74 516 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 CYB561D2O14569 222 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 HCRTO43612 131 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 TRIM49P0CI25 452 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 TRIM49CP0CI26 452 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 SRGAP2BP0DMP2 458 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 CREMQ03060 361 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 RAB33AQ14088 237 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 MYBPC2Q14324 1141 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 DUOXA2Q1HG44 320 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 EDRF1Q3B7T1 1238 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 WSCD1Q658N2 575 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 ZC3H3Q8IXZ2 948 aaKnown RBP20.16■□□□□ 0.82
CASC4-209ENST00000559222 KREMEN2Q8NCW0 462 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 OR10T2Q8NGX3 314 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 SUSD6Q92537 303 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 ZNF560Q96MR9 790 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 DZANK1Q9NVP4 752 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 CTNND2Q9UQB3 1225 aa20.16■□□□□ 0.82
CASC4-209ENST00000559222 VNN1O95497 513 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 VNN2O95498 520 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 ODC1P11926 461 aa20.15■□□□□ 0.82
CASC4-209ENST00000559222 TYMPP19971 482 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms