RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 USP40Q9NVE5 1235 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 PRR5-ARHGAP8B1AHC4 643 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 DNAJB5O75953 348 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 FGF18O76093 207 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 HARSP12081 509 aaKnown RBP13.4□□□□□ -0.26
CASC4-208ENST00000559151 GRM7Q14831 915 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 CRB2Q5IJ48 1285 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 MICU3Q86XE3 530 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 AOPEPQ8N6M6 819 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 ZFP28Q8NHY6 868 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 BRI3BPQ8WY22 251 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 GNRHR2Q96P88 292 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 OR14A2Q96R54 314 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 SPON1Q9HCB6 807 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 FAM30AQ9NZY2 134 aa13.4□□□□□ -0.26
CASC4-208ENST00000559151 AGFG2O95081 481 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 GNAT2P19087 354 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
CASC4-208ENST00000559151 MAPK10P53779 464 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 TNFAIP2Q03169 654 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 TUBB8Q3ZCM7 444 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
CASC4-208ENST00000559151 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 CPEB1Q9BZB8 566 aaKnown RBP13.39□□□□□ -0.27
CASC4-208ENST00000559151 GPR35Q9HC97 309 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 GJB4Q9NTQ9 266 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 AGAP1Q9UPQ3 857 aa13.39□□□□□ -0.27
CASC4-208ENST00000559151 A0A1W2PPC4 97 aa13.38□□□□□ -0.27
CASC4-208ENST00000559151 RPS19P39019 145 aaKnown RBP13.38□□□□□ -0.27
CASC4-208ENST00000559151 MFSD5Q6N075 450 aa13.38□□□□□ -0.27
CASC4-208ENST00000559151 SP8Q8IXZ3 490 aa13.38□□□□□ -0.27
CASC4-208ENST00000559151 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
CASC4-208ENST00000559151 ATP11CQ8NB49 1132 aa13.38□□□□□ -0.27
CASC4-208ENST00000559151 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
CASC4-208ENST00000559151 DUSP10Q9Y6W6 482 aa13.38□□□□□ -0.27
CASC4-208ENST00000559151 PAX4O43316 350 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 LAMTOR5O43504 91 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 HALP42357 657 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 RAB32Q13637 225 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
CASC4-208ENST00000559151 EFCAB12Q6NXP0 572 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 FITM2Q8N6M3 262 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 ZNF518BQ9C0D4 1074 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 TINAGL1Q9GZM7 467 aaPredicted RBP13.37□□□□□ -0.27
CASC4-208ENST00000559151 PLA2G3Q9NZ20 509 aa13.37□□□□□ -0.27
CASC4-208ENST00000559151 TMEM233B4DJY2 109 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 M0QYG6 137 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 TRIM13O60858 407 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 ANXA1P04083 346 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 ITGB1P05556 798 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 THP07101 528 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 SURF1Q15526 300 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 SLC35G1Q2M3R5 365 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 SLC44A4Q53GD3 710 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 MPP5Q8N3R9 675 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 SNX22Q96L94 193 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 KLHL32Q96NJ5 620 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
CASC4-208ENST00000559151 GRPP07492 148 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 FGFR2P21802 821 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 ELAVL1Q15717 326 aaKnown RBP13.35□□□□□ -0.27
CASC4-208ENST00000559151 ARL13BQ3SXY8 428 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 USP37Q86T82 979 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 ANKRD42Q8N9B4 389 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 ST8SIA2Q92186 375 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 SCAMP4Q969E2 229 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 PLEKHM1Q9Y4G2 1056 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 ADAMTS20P59510 1910 aa13.35□□□□□ -0.27
CASC4-208ENST00000559151 A0A087WV62 115 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 E9PLN8 166 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 PIP5K1CO60331 668 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 PRSS23O95084 383 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 HSPA7P48741 367 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 SLC11A2P49281 568 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 UCP3P55916 312 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 MPEG1Q2M385 716 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 SLC15A4Q8N697 577 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 MB21D1Q8N884 522 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 OR52N2Q8NGI0 321 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 OR56A3Q8NH54 315 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 ZSCAN18Q8TBC5 510 aaPredicted RBP13.34□□□□□ -0.27
CASC4-208ENST00000559151 IQCDQ96DY2 449 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 VKORC1Q9BQB6 163 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 IMPG2Q9BZV3 1241 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 POGKQ9P215 609 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 MYO1AQ9UBC5 1043 aa13.34□□□□□ -0.27
CASC4-208ENST00000559151 HECAQ9UBI9 543 aaPredicted RBP13.34□□□□□ -0.27
CASC4-208ENST00000559151 A0A087WWL8 130 aa13.33□□□□□ -0.28
CASC4-208ENST00000559151 PYCARD-AS1I3L0S3 204 aa13.33□□□□□ -0.28
CASC4-208ENST00000559151 MT-ND5P03915 603 aa13.33□□□□□ -0.28
CASC4-208ENST00000559151 ANXA2P07355 339 aaKnown RBP13.33□□□□□ -0.28
CASC4-208ENST00000559151 MSX2P35548 267 aaPredicted RBP13.33□□□□□ -0.28
CASC4-208ENST00000559151 TECP42680 631 aa13.33□□□□□ -0.28
CASC4-208ENST00000559151 CCDC174Q6PII3 467 aa13.33□□□□□ -0.28
CASC4-208ENST00000559151 MED25Q71SY5 747 aa13.33□□□□□ -0.28
CASC4-208ENST00000559151 DDX17Q92841 729 aaKnown RBP13.33□□□□□ -0.28
CASC4-208ENST00000559151 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms