RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
PSMA4-207ENST00000558635 C3orf58Q8NDZ4 430 aa11.22□□□□□ -0.61
PSMA4-207ENST00000558635 POF1BQ8WVV4 589 aa11.22□□□□□ -0.61
PSMA4-207ENST00000558635 FUCA2Q9BTY2 467 aa11.22□□□□□ -0.61
PSMA4-207ENST00000558635 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
PSMA4-207ENST00000558635 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
PSMA4-207ENST00000558635 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
PSMA4-207ENST00000558635 ADAM28Q9UKQ2 775 aa11.22□□□□□ -0.61
PSMA4-207ENST00000558635 TMEM189-UBE2V1I3L0A0 370 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 PIRO00625 290 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 IKBKBO14920 756 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 LPXNO60711 386 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 RNF40O75150 1001 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 CSPG5O95196 566 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
PSMA4-207ENST00000558635 GNA14O95837 355 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 ITGB3P05106 788 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 TRIM49P0CI25 452 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 TRIM49CP0CI26 452 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 POLR2BP30876 1174 aaKnown RBP11.21□□□□□ -0.61
PSMA4-207ENST00000558635 BRCC3P46736 316 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 MCCD1P59942 119 aaPredicted RBP11.21□□□□□ -0.61
PSMA4-207ENST00000558635 UBE3AQ05086 875 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 ENPEPQ07075 957 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 CAMK1Q14012 370 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 FUT10Q6P4F1 479 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 TRAPPC11Q7Z392 1133 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 FRMD5Q7Z6J6 570 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 USP37Q86T82 979 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 DDX53Q86TM3 631 aaKnown RBP11.21□□□□□ -0.61
PSMA4-207ENST00000558635 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 ENOX1Q8TC92 643 aaKnown RBP11.21□□□□□ -0.61
PSMA4-207ENST00000558635 GPR62Q9BZJ7 368 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 METTL14Q9HCE5 456 aaKnown RBP11.21□□□□□ -0.61
PSMA4-207ENST00000558635 SIX4Q9UIU6 781 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 AGAP1Q9UPQ3 857 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 LZTS1Q9Y250 596 aa11.21□□□□□ -0.61
PSMA4-207ENST00000558635 TRIP11Q15643 1979 aa11.21□□□□□ -0.62
PSMA4-207ENST00000558635 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
PSMA4-207ENST00000558635 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.62
PSMA4-207ENST00000558635 SF3B1O75533 1304 aaKnown RBP eCLIP11.2□□□□□ -0.625e-8■■■■■ 37.4
PSMA4-207ENST00000558635 I3L4J1 428 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 SPTLC1O15269 473 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 EFEMP2O95967 443 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 CST3P01034 146 aaPredicted RBP11.2□□□□□ -0.62
PSMA4-207ENST00000558635 C4BPAP04003 597 aaKnown RBP11.2□□□□□ -0.62
PSMA4-207ENST00000558635 KRT19P08727 400 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 GCLMP48507 274 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 AP3M2P53677 418 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 ERVFC1P60507 584 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 RBP5P82980 135 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 KCNC4Q03721 635 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 PPP3CAQ08209 521 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 BIRC3Q13489 604 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 ADGRE1Q14246 886 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 TIGD5Q53EQ6 642 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 DCAF17Q5H9S7 520 aaPredicted RBP11.2□□□□□ -0.62
PSMA4-207ENST00000558635 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 TDRD10Q5VZ19 366 aaKnown RBP11.2□□□□□ -0.62
PSMA4-207ENST00000558635 IRF2BP1Q8IU81 584 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 VPS52Q8N1B4 723 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 B3GALT6Q96L58 329 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 GUCD1Q96NT3 240 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
PSMA4-207ENST00000558635 LMAN2LQ9H0V9 348 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 THAP9Q9H5L6 903 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 MMRN2Q9H8L6 949 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 NUB1Q9Y5A7 615 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 KIAA1671Q9BY89 1806 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 TRANK1O15050 2925 aa11.2□□□□□ -0.62
PSMA4-207ENST00000558635 ANK1P16157 1881 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 TRAPPC3O43617 180 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 STX10O60499 249 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 PHACTR2O75167 634 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 SOD2P04179 222 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 GTF2H1P32780 548 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 IRS1P35568 1242 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
PSMA4-207ENST00000558635 LILRA4P59901 499 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 MYL5Q02045 173 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 ELAVL2Q12926 359 aaKnown RBP11.19□□□□□ -0.62
PSMA4-207ENST00000558635 PTPROQ16827 1216 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 USP41Q3LFD5 358 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 ZACNQ401N2 412 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 HSP90AA4PQ58FG1 418 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 FAM171A1Q5VUB5 890 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 C15orf39Q6ZRI6 1047 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 SV2AQ7L0J3 742 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 TMC7Q7Z402 723 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 CREBRFQ8IUR6 639 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 TRIM59Q8IWR1 403 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 RNF168Q8IYW5 571 aaPredicted RBP11.19□□□□□ -0.62
PSMA4-207ENST00000558635 AOPEPQ8N6M6 819 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 LRRC52Q8N7C0 313 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 MICAL1Q8TDZ2 1067 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 AUTS2Q8WXX7 1259 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 MYLIPQ8WY64 445 aa11.19□□□□□ -0.62
PSMA4-207ENST00000558635 SLC35C1Q96A29 364 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms