RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 GTF2F1P35269 517 aaKnown RBP eCLIP12.37□□□□□ -0.433e-6■■■■■ 28.7
RORA-207ENST00000558234 NCBP1Q09161 790 aaKnown RBP12.37□□□□□ -0.43
RORA-207ENST00000558234 HSP90AA2PQ14568 343 aaPredicted RBP12.37□□□□□ -0.43
RORA-207ENST00000558234 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
RORA-207ENST00000558234 C18orf25Q96B23 403 aaPredicted RBP12.37□□□□□ -0.43
RORA-207ENST00000558234 RAD9AQ99638 391 aa12.37□□□□□ -0.43
RORA-207ENST00000558234 PAAF1Q9BRP4 392 aa12.37□□□□□ -0.43
RORA-207ENST00000558234 PBX4Q9BYU1 374 aa12.37□□□□□ -0.43
RORA-207ENST00000558234 XIRP2A4UGR9 3374 aa12.37□□□□□ -0.43
RORA-207ENST00000558234 TBC1D4O60343 1298 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 LILRB3O75022 631 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 TERF1P54274 439 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 LRRC43Q8N309 656 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 BICD1Q96G01 975 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 TOPORSQ9NS56 1045 aaPredicted RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 FAM207AQ9NSI2 230 aaPredicted RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 FRMD4BQ9Y2L6 1034 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 PCDHB7Q9Y5E2 793 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 LINC01553A4QN01 128 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 F8VZ95 297 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 M0QZQ0 153 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 EXOC3L4Q17RC7 722 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 PRPF38BQ5VTL8 546 aaKnown RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 THNSL1Q8IYQ7 743 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 UROC1Q96N76 676 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 POP1Q99575 1024 aaKnown RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 L2HGDHQ9H9P8 463 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 TMEM8AQ9HCN3 771 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 DNAJB4Q9UDY4 337 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 NME7Q9Y5B8 376 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 RFX1P22670 979 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 SCNN1GP51170 649 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 TMEM173Q86WV6 379 aaPredicted RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 FAM84AQ96KN4 292 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 LBHD1Q9BQE6 289 aaPredicted RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 NUCKS1Q9H1E3 243 aaKnown RBP12.36□□□□□ -0.43
RORA-207ENST00000558234 GCNT4Q9P109 453 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 SLC4A7Q9Y6M7 1214 aa12.36□□□□□ -0.43
RORA-207ENST00000558234 PPEF2O14830 753 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 AP3M2P53677 418 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 TUSC3Q13454 348 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 MRPL58Q14197 206 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 SURF1Q15526 300 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 C9orf57Q5W0N0 161 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 GBP6Q6ZN66 633 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 ARHGEF19Q8IW93 802 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 KREMEN1Q96MU8 473 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 RPF1Q9H9Y2 349 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 GDAP2Q9NXN4 497 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 KANSL3Q9P2N6 904 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 APEX2Q9UBZ4 518 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 EPN1Q9Y6I3 576 aaPredicted RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 BTNL10A8MVZ5 291 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 SPTLC1O15269 473 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 ERVK-21P61565 698 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 CAMK1Q14012 370 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 SLC39A11Q8N1S5 342 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 COLGALT1Q8NBJ5 622 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 PKMYT1Q99640 499 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 STK33Q9BYT3 514 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 UBE2OQ9C0C9 1292 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 F8W810 466 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 EXOC3O60645 756 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
RORA-207ENST00000558234 PBX2P40425 430 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 TAP1Q03518 808 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 GPR65Q8IYL9 337 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 ACRBPQ8NEB7 543 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
RORA-207ENST00000558234 TUBB4AP04350 444 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 GALTP07902 379 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 LRRC52Q8N7C0 313 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 DDX1Q92499 740 aaKnown RBP12.34□□□□□ -0.43
RORA-207ENST00000558234 DESI2Q9BSY9 194 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 BCO2Q9BYV7 579 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 TMEM265A0A087WTH1 108 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 LPXNO60711 386 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 CYP11A1P05108 521 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 ITGB1P05556 798 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 TPM2P07951 284 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 MYOGP15173 224 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 SLC11A1P49279 550 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 SV2AQ7L0J3 742 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 RNPC3Q96LT9 517 aaKnown RBP12.34□□□□□ -0.43
RORA-207ENST00000558234 CRACR2AQ9BSW2 395 aa12.34□□□□□ -0.43
RORA-207ENST00000558234 UBQLN1Q9UMX0 589 aaKnown RBP12.34□□□□□ -0.43
RORA-207ENST00000558234 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms