RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 KCNH3Q9ULD8 1083 aa11□□□□□ -0.65
USP3-207ENST00000558218 CLUHO75153 1309 aa11□□□□□ -0.65
USP3-207ENST00000558218 C5orf42Q9H799 3197 aa11□□□□□ -0.65
USP3-207ENST00000558218 VWA8A3KMH1 1905 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 ZNF318Q5VUA4 2279 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 ARHGEF37A1IGU5 675 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 LACTBL1A8MY62 500 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 M0QZQ0 153 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 SPTLC2O15270 562 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 MEFVO15553 781 aaPredicted RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 OAZ2O95190 189 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 C8AP07357 584 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 HSP90AA1P07900 732 aaKnown RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 CXCL8P10145 99 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 HARSP12081 509 aaKnown RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 LAMP2P13473 410 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 ATF2P15336 505 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 SP100P23497 879 aaPredicted RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 TKTP29401 623 aaKnown RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 STAT6P42226 847 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 BRCC3P46736 316 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 AARSP49588 968 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP3-207ENST00000558218 AMPD3Q01432 767 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 CEBPZQ03701 1054 aaKnown RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 STK38Q15208 465 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 SPATA1Q5VX52 437 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 NT5DC4Q86YG4 428 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 GLYCTKQ8IVS8 523 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 TCEAL8Q8IYN2 117 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 DNAJC19Q96DA6 116 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 CLIC6Q96NY7 704 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 MSTO1Q9BUK6 570 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 MRPL44Q9H9J2 332 aaKnown RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 GOLGA2P5Q9HBQ8 144 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
USP3-207ENST00000558218 WNT16Q9UBV4 365 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 RAPGEFL1Q9UHV5 662 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 CFAP45Q9UL16 551 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 CDY1Q9Y6F8 540 aa10.99□□□□□ -0.65
USP3-207ENST00000558218 PDCD11Q14690 1871 aaKnown RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 FRMD3A2A2Y4 597 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 MYMKA6NI61 221 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 KIAA0391O15091 583 aaKnown RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 ADAM12O43184 909 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 CUTAO60888 179 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 MICAL2O94851 1124 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 LDHAP00338 332 aaKnown RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 FSHRP23945 695 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 IGFBP6P24592 240 aaPredicted RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 NMT1P30419 496 aaKnown RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 AVPR2P30518 371 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 GBP2P32456 591 aaPredicted RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 ELF1P32519 619 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 MCM4P33991 863 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 CLCN5P51795 746 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 ENOX2Q16206 610 aaKnown RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 SEZ6Q53EL9 994 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 ADALQ6DHV7 355 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 CNNM4Q6P4Q7 775 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 RSPO2Q6UXX9 243 aaPredicted RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 STXBP4Q6ZWJ1 553 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 DYMQ7RTS9 669 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 BEST2Q8NFU1 509 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 C18orf25Q96B23 403 aaPredicted RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 ACCSQ96QU6 501 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 TNMDQ9H2S6 317 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 TMEM206Q9H813 350 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 IL21Q9HBE4 155 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 AGO2Q9UKV8 859 aaKnown RBP10.98□□□□□ -0.65
USP3-207ENST00000558218 DUSP12Q9UNI6 340 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 C2CD2Q9Y426 696 aa10.98□□□□□ -0.65
USP3-207ENST00000558218 ANHXE9PGG2 379 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 I3L4J1 428 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 N4BP1O75113 896 aaKnown RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 ASGR2P07307 311 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 ZSCAN22P10073 491 aaPredicted RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 PTPN2P17706 415 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 TYMPP19971 482 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 TNFSF9P41273 254 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 ROR1Q01973 937 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 CTXN3Q4LDR2 81 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 ZC2HC1CQ53FD0 456 aaPredicted RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 L1TD1Q5T7N2 865 aaKnown RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 ZNF280DQ6N043 979 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 SFR1Q86XK3 245 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 SLC44A3Q8N4M1 653 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 IQUBQ8NA54 791 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 SLC7A14Q8TBB6 771 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 FEZF2Q8TBJ5 459 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 KCNG4Q8TDN1 519 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 MYADMQ96S97 322 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 PYM1Q9BRP8 204 aaKnown RBP10.97□□□□□ -0.65
USP3-207ENST00000558218 MAGEF1Q9HAY2 307 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 PANK4Q9NVE7 773 aa10.97□□□□□ -0.65
USP3-207ENST00000558218 KBTBD4Q9NVX7 518 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms