RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CYP2C19P33261 490 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 PIK3CGP48736 1102 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 VAV2P52735 878 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 INHBEP58166 350 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 DSC2Q02487 901 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 SNAPC2Q13487 334 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 CYP2A13Q16696 494 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 FLYWCH1Q4VC44 716 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 ODR4Q5SWX8 454 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 HEATR3Q7Z4Q2 680 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 CLNKQ7Z7G1 428 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 GPR149Q86SP6 731 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 GRAMD1CQ8IYS0 662 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 SH2D3CQ8N5H7 860 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 PDPRQ8NCN5 879 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 TMIEQ8NEW7 156 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 STAG1Q8WVM7 1258 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 MVB12AQ96EY5 273 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 Q96MF0 132 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 COQ10AQ96MF6 247 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 DMRTA2Q96SC8 542 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 TOR3AQ9H497 397 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 WDCPQ9H6R7 721 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 LMBRD1Q9NUN5 540 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 SIDT1Q9NXL6 827 aaKnown RBP4.36□□□□□ -1.71
SPG11-206ENST00000558093 DKK2Q9UBU2 259 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 ZNF180Q9UJW8 692 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 SLC45A2Q9UMX9 530 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 DMTF1Q9Y222 760 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 NEU2Q9Y3R4 380 aa4.36□□□□□ -1.71
SPG11-206ENST00000558093 CCDC195A0A1B0GUA6 201 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 ABLIM3O94929 683 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 GNAI2P04899 355 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 GJB1P08034 283 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 EGR2P11161 476 aaPredicted RBP4.35□□□□□ -1.71
SPG11-206ENST00000558093 KCNA2P16389 499 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 ZNF135P52742 658 aaPredicted RBP4.35□□□□□ -1.71
SPG11-206ENST00000558093 PURAQ00577 322 aaKnown RBP4.35□□□□□ -1.71
SPG11-206ENST00000558093 FPGSQ05932 587 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 MCL1Q07820 350 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 MPP3Q13368 585 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 ERCC6LQ2NKX8 1250 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 TAPT1Q6NXT6 567 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 CAMKK1Q8N5S9 505 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 TNPO1Q92973 898 aaKnown RBP4.35□□□□□ -1.71
SPG11-206ENST00000558093 MTFMTQ96DP5 389 aaKnown RBP4.35□□□□□ -1.71
SPG11-206ENST00000558093 LRGUKQ96M69 825 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 AGAP2Q99490 1192 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 SMOQ99835 787 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 UNKLQ9H9P5 680 aaKnown RBP4.35□□□□□ -1.71
SPG11-206ENST00000558093 TCF7L1Q9HCS4 588 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 TMEM74BQ9NUR3 256 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 RLIMQ9NVW2 624 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 C11orf21Q9P2W6 132 aa4.35□□□□□ -1.71
SPG11-206ENST00000558093 PRAMEF33A0A0G2JMD5 474 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 MYADML2A6NDP7 307 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 NT5C1B-RDH14C9J2C7 533 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 H3BUI4 141 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 AKAP10O43572 662 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 PRAMEF10O60809 474 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 S100BP04271 92 aaPredicted RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 TGM1P22735 817 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 PRDX5P30044 214 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 PHKA1P46020 1223 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 FXR1P51114 621 aaKnown RBP eCLIP4.34□□□□□ -1.71
SPG11-206ENST00000558093 RAB27AP51159 221 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 MAP2K6P52564 334 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 HK3P52790 923 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 EPHB1P54762 984 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 RPS7P62081 194 aaKnown RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 SMN1Q16637 294 aaKnown RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 PDSS2Q86YH6 399 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 CFAP52Q8N1V2 620 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 PRR18Q8N4B5 295 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 NSUN7Q8NE18 718 aaKnown RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 BRIX1Q8TDN6 353 aaKnown RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 SSH3Q8TE77 659 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 JPH3Q8WXH2 748 aaPredicted RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 SNX19Q92543 992 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 SCAMP4Q969E2 229 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 NACC2Q96BF6 587 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 ZG16BQ96DA0 208 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 FAM167AQ96KS9 214 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 TRIB1Q96RU8 372 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 AIFM2Q9BRQ8 373 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 RHOBTB2Q9BYZ6 727 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 SIK2Q9H0K1 926 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 NMRK2Q9NPI5 230 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 LRIT1Q9P2V4 623 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 ZNHIT2Q9UHR6 403 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 PNMA8BQ9ULN7 279 aaPredicted RBP4.34□□□□□ -1.71
SPG11-206ENST00000558093 NR2E3Q9Y5X4 410 aa4.34□□□□□ -1.71
SPG11-206ENST00000558093 A0A1W2PS29 197 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 POLRMTO00411 1230 aaKnown RBP4.33□□□□□ -1.72
SPG11-206ENST00000558093 AP1G1O43747 822 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 PPFIA2O75334 1257 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 ZFPL1O95159 310 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 NUDT3O95989 172 aa4.33□□□□□ -1.72
SPG11-206ENST00000558093 CHEK2O96017 543 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms