RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
TPM1-209ENST00000558072 GANQ9H2C0 597 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 MIOSQ9NXC5 875 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 SLC4A7Q9Y6M7 1214 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 PTPRJQ12913 1337 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
TPM1-209ENST00000558072 TBKBP1A7MCY6 615 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 KPNA7A9QM74 516 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 PODXLO00592 558 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 HUS1O60921 280 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 MFAP3LO75121 409 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 ARHGEF15O94989 841 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
TPM1-209ENST00000558072 POMCP01189 267 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 GYPCP04921 128 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 ANXA13P27216 316 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 CASP14P31944 242 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 RABGGTBP53611 331 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 CUL2Q13617 745 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 RAPGEF1Q13905 1077 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 ARID5BQ14865 1188 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 WDR72Q3MJ13 1102 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 HS1BP3Q53T59 392 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 SFMBT2Q5VUG0 894 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 RRAGAQ7L523 313 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 SPRED2Q7Z698 418 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 TOP6BLQ8N6T0 577 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 CPLX3Q8WVH0 158 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 RABGGTAQ92696 567 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 SEMA4DQ92854 862 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 ELMO3Q96BJ8 720 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 CASD1Q96PB1 797 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 GDF15Q99988 308 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
TPM1-209ENST00000558072 TTYH3Q9C0H2 523 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 TBC1D13Q9NVG8 400 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 SIX4Q9UIU6 781 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 INSL6Q9Y581 213 aa13.3□□□□□ -0.28
TPM1-209ENST00000558072 MYOGP15173 224 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 LAG3P18627 525 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 IGFBP6P24592 240 aaPredicted RBP13.29□□□□□ -0.28
TPM1-209ENST00000558072 HNRNPH3P31942 346 aaKnown RBP13.29□□□□□ -0.28
TPM1-209ENST00000558072 ALDH7A1P49419 539 aaKnown RBP13.29□□□□□ -0.28
TPM1-209ENST00000558072 CDK17Q00537 523 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 DSC1Q08554 894 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 UPP1Q16831 310 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 PHLDB3Q6NSJ2 640 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 METTL23Q86XA0 190 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
TPM1-209ENST00000558072 RNPC3Q96LT9 517 aaKnown RBP13.29□□□□□ -0.28
TPM1-209ENST00000558072 YME1L1Q96TA2 773 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 DNAJC7Q99615 494 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 OXCT2Q9BYC2 517 aaPredicted RBP13.29□□□□□ -0.28
TPM1-209ENST00000558072 XYLT2Q9H1B5 865 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 GOLGA2P5Q9HBQ8 144 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 SIX2Q9NPC8 291 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 NLRC4Q9NPP4 1024 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 AIPL1Q9NZN9 384 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 TUBGCP4Q9UGJ1 667 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 KIAA1257Q9ULG3 409 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 FAN1Q9Y2M0 1017 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 RWDD3Q9Y3V2 267 aa13.29□□□□□ -0.28
TPM1-209ENST00000558072 LCHNA4D1U4 455 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 TACC1O75410 805 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 B3GAT3O94766 335 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 GFPT2O94808 682 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 NOL4O94818 638 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 ODC1P11926 461 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 SOX5P35711 763 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 PPM1AP35813 382 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 PBX3P40426 434 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 LHX1P48742 406 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 LILRA4P59901 499 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 PTK2Q05397 1052 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
TPM1-209ENST00000558072 LRMPQ12912 555 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
TPM1-209ENST00000558072 NAB2Q15742 525 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 ASIC2Q16515 512 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 PPP1R2P3Q6NXS1 205 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 PDXDC1Q6P996 788 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 CCDC186Q7Z3E2 898 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 UNC93AQ86WB7 457 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 TMTC1Q8IUR5 882 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 COLGALT2Q8IYK4 626 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 TXLNBQ8N3L3 684 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 APPL2Q8NEU8 664 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 SHC3Q92529 594 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 MMS19Q96T76 1030 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 RAD9AQ99638 391 aa13.28□□□□□ -0.28
TPM1-209ENST00000558072 BCO2Q9BYV7 579 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1918.4 ms