RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 PCDHGB4Q9UN71 923 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 SLC45A1Q9Y2W3 748 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 PCDHGB5Q9Y5G0 923 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 ECM29Q5VYK3 1845 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 PNPLA7Q6ZV29 1317 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 M0QX08 132 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 PSMD11O00231 422 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 ZW10O43264 779 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 GABBR2O75899 941 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 CDK9P50750 372 aaKnown RBP11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 AQP4P55087 323 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 USP41Q3LFD5 358 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 TAF1BQ53T94 588 aaPredicted RBP11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 EPS8L3Q8TE67 593 aaKnown RBP11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 SCFD2Q8WU76 684 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 CDKL2Q92772 493 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 NDE1Q9NXR1 346 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 SLC12A7Q9Y666 1083 aa11.62□□□□□ -0.55
SEMA4B-204ENST00000558065 TMEM120BA0PK00 339 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 GNPATO15228 680 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 MAPK13O15264 365 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 RBP3P10745 1247 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 ICAM2P13598 275 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 MIER3Q7Z3K6 550 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 NDUFAF2Q8N183 169 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 DEPDC4Q8N2C3 294 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 AADATQ8N5Z0 425 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 MB21D1Q8N884 522 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 PAIP1Q9H074 479 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 NT5C3AQ9H0P0 336 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 PPM1HQ9ULR3 514 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 C6orf222P0C671 652 aaPredicted RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 C6orf118Q5T5N4 469 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 RWDD4Q6NW29 188 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 ELMOD2Q8IZ81 293 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 GALNT4Q8N4A0 578 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 KIAA1958Q8N8K9 716 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 SLC7A3Q8WY07 619 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 FAM89AQ96GI7 184 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 PABPC3Q9H361 631 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 S100A14Q9HCY8 104 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 THEGQ9P2T0 379 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 A0A1W2PQC6 194 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 POLR2DO15514 142 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 SIN3BO75182 1162 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 THRAP10827 490 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 ATP6V1B1P15313 513 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 CD9P21926 228 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 PTPN5P54829 565 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 RPL26P61254 145 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 AUHQ13825 339 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 MPP2Q14168 576 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 PSMD6Q15008 389 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 VGLL2Q8N8G2 317 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 TP53INP1Q96A56 240 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 TAMM41Q96BW9 452 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 ANKRD2Q9GZV1 360 aa11.61□□□□□ -0.55
SEMA4B-204ENST00000558065 KCNJ18B7U540 433 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 PJA2O43164 708 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 RARBP10826 455 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 TAC1P20366 129 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 ITGA6P23229 1130 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 PDIA3P30101 505 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 KCNJ12Q14500 433 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 MPRIPQ6WCQ1 1025 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 STOX1Q6ZVD7 989 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 AACSQ86V21 672 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 OLFM1Q99784 485 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 IMPG2Q9BZV3 1241 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 TP63Q9H3D4 680 aaPredicted RBP11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 STARD13Q9Y3M8 1113 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 HDAC3O15379 428 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 TLR2O60603 784 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 HNRNPCL1O60812 293 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 RNASEH2AO75792 299 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 CACNB3P54284 484 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 C21orf59P57076 290 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 CREB5Q02930 508 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 DSC3Q14574 896 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 CLUL1Q15846 466 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 ISLR2Q6UXK2 745 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 SPATA5Q8NB90 893 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 PTCD3Q96EY7 689 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 MAP6Q96JE9 813 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 CLPBQ9H078 707 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 SAR1AQ9NR31 198 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 UCKL1Q9NWZ5 548 aa11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
SEMA4B-204ENST00000558065 PVALEFA0A1B0GWK0 134 aa11.59□□□□□ -0.55
SEMA4B-204ENST00000558065 F8W8V4 182 aa11.59□□□□□ -0.55
SEMA4B-204ENST00000558065 TAF5LO75529 589 aa11.59□□□□□ -0.55
SEMA4B-204ENST00000558065 RRM1P23921 792 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms