RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PIK3R5Q8WYR1 880 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 SENP8Q96LD8 212 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 ZNF560Q96MR9 790 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 MMRN2Q9H8L6 949 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 PCDHB8Q9UN66 801 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 IRAK3Q9Y616 596 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 CYB561D2O14569 222 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 SYN3O14994 580 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 SLC16A3O15427 465 aaKnown RBP15.45■□□□□ 0.06
USP3-205ENST00000557884 ADAM12O43184 909 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 PHACTR2O75167 634 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 CLSTN1O94985 981 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 ODC1P11926 461 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 SV2CQ496J9 727 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 TDRD10Q5VZ19 366 aaKnown RBP15.45■□□□□ 0.06
USP3-205ENST00000557884 LRRC52Q8N7C0 313 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 EFHBQ8N7U6 833 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 CDCA3Q99618 268 aaPredicted RBP15.45■□□□□ 0.06
USP3-205ENST00000557884 MKNK1Q9BUB5 465 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 RXFP1Q9HBX9 757 aa15.45■□□□□ 0.06
USP3-205ENST00000557884 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.45■□□□□ 0.06
USP3-205ENST00000557884 TRIP11Q15643 1979 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 KPNA7A9QM74 516 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 M0QZQ0 153 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 GLP2RO95838 553 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 CST3P01034 146 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 C4BPAP04003 597 aaKnown RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 ADH1AP07327 375 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 EPCAMP16422 314 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 KCNA5P22460 613 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 PNPLA4P41247 253 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 GCLMP48507 274 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 NDUFV1P49821 464 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 CLDN10P78369 228 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 DLX2Q07687 328 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 ADAM15Q13444 863 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 TRPC3Q13507 836 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 CLUL1Q15846 466 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 CCDC40Q4G0X9 1142 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 DCAF17Q5H9S7 520 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 SASS6Q6UVJ0 657 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 RSPO2Q6UXX9 243 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 USP37Q86T82 979 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 PALB2Q86YC2 1186 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 HLA-CQ95604 372 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 ELMO3Q96BJ8 720 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 PABPC5Q96DU9 382 aaKnown RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 BORCS6Q96GS4 357 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 HPDLQ96IR7 371 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 CEP63Q96MT8 703 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 MED15Q96RN5 788 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 CLSTN3Q9BQT9 956 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 SRRTQ9BXP5 876 aaKnown RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 UBE2ZQ9H832 354 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 ARMCX3Q9UH62 379 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 RWDD2AQ9UIY3 292 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 BARX2Q9UMQ3 279 aaPredicted RBP15.44■□□□□ 0.06
USP3-205ENST00000557884 HCFC2Q9Y5Z7 792 aa15.44■□□□□ 0.06
USP3-205ENST00000557884 H3BQ06 376 aaPredicted RBP15.43■□□□□ 0.06
USP3-205ENST00000557884 NCK2O43639 380 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 TBX10O75333 385 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 SPATA31D3P0C874 917 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 PTMSP20962 102 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 AP3M2P53677 418 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 ARPP19P56211 112 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 MYL6P60660 151 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 CREMQ03060 361 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 TFF2Q03403 129 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
USP3-205ENST00000557884 PPP3CAQ08209 521 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 MYO1EQ12965 1108 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 NCOA4Q13772 614 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 CTC1Q2NKJ3 1217 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 CTXN3Q4LDR2 81 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 TCERG1LQ5VWI1 586 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 ZNF280DQ6N043 979 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 PDXDC1Q6P996 788 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 SPATA31D4Q6ZUB0 917 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 ANKS3Q6ZW76 656 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 FILIP1Q7Z7B0 1213 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 GPR65Q8IYL9 337 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP3-205ENST00000557884 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 MTRRQ9UBK8 725 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 DACH1Q9UI36 760 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 CDY1Q9Y6F8 540 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 UNC80Q8N2C7 3258 aa15.43■□□□□ 0.06
USP3-205ENST00000557884 ANK1P16157 1881 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 H7C4K7 107 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 IKBKBO14920 756 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 SLC34A2O95436 690 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 VNN1O95497 513 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 GLUD1P00367 558 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 TYMPP19971 482 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 PAX3P23760 479 aa15.42■□□□□ 0.06
USP3-205ENST00000557884 OR1D2P34982 312 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms