RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KLK15Q9H2R5 256 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 INTS13Q9NVM9 706 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 JKAMPQ9P055 326 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 SLC17A6Q9P2U8 582 aa5.65□□□□□ -1.5
VRK1-207ENST00000557352 CCDC154A6NI56 674 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 LRRC3CA6NJW4 275 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 MYBL2P10244 700 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 RPS7P62081 194 aaKnown RBP5.64□□□□□ -1.51
VRK1-207ENST00000557352 FPGSQ05932 587 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 ZNF844Q08AG5 666 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 RAB39AQ14964 217 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 ABCB5Q2M3G0 1257 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 CD300EQ496F6 205 aaPredicted RBP5.64□□□□□ -1.51
VRK1-207ENST00000557352 ZNF384Q8TF68 577 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 DMRTA2Q96SC8 542 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 HEPHQ9BQS7 1158 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 PACSIN1Q9BY11 444 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.64□□□□□ -1.51
VRK1-207ENST00000557352 TRHDEQ9UKU6 1024 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 SLC45A2Q9UMX9 530 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 PCDHB1Q9Y5F3 818 aa5.64□□□□□ -1.51
VRK1-207ENST00000557352 FZD9O00144 591 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 PROM1O43490 865 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 XPOTO43592 962 aaKnown RBP5.63□□□□□ -1.51
VRK1-207ENST00000557352 CD1AP06126 327 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 TLE1Q04724 770 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 MTMR1Q13613 665 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 DYRK1AQ13627 763 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 ZNF365Q70YC5 407 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 SLC30A5Q8TAD4 765 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 LPIN2Q92539 896 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 KAT5Q92993 513 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 COA7Q96BR5 231 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 CLPTM1LQ96KA5 538 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 CCDC8Q9H0W5 538 aaPredicted RBP5.63□□□□□ -1.51
VRK1-207ENST00000557352 IL17RBQ9NRM6 502 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 FRMD4BQ9Y2L6 1034 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 NEU2Q9Y3R4 380 aa5.63□□□□□ -1.51
VRK1-207ENST00000557352 MPPED1O15442 326 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 RBMXL2O75526 392 aaKnown RBP5.62□□□□□ -1.51
VRK1-207ENST00000557352 SUN1O94901 812 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 GUCY2FP51841 1108 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 MAPK10P53779 464 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
VRK1-207ENST00000557352 PCBP2Q15366 365 aaKnown RBP eCLIP5.62□□□□□ -1.51
VRK1-207ENST00000557352 KAZNQ674X7 775 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 GADL1Q6ZQY3 521 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 TSHZ1Q6ZSZ6 1077 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 CFAP52Q8N1V2 620 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 NSUN7Q8NE18 718 aaKnown RBP5.62□□□□□ -1.51
VRK1-207ENST00000557352 TMIEQ8NEW7 156 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 LRIG1Q96JA1 1093 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 TEKT5Q96M29 485 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 IMPG2Q9BZV3 1241 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 ASB6Q9NWX5 421 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 CALCOCO1Q9P1Z2 691 aa5.62□□□□□ -1.51
VRK1-207ENST00000557352 CCDC195A0A1B0GUA6 201 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 SHTN1A0MZ66 631 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 PROP1O75360 226 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 CDK11BP21127 795 aaKnown RBP5.61□□□□□ -1.51
VRK1-207ENST00000557352 ANXA11P50995 505 aaKnown RBP5.61□□□□□ -1.51
VRK1-207ENST00000557352 KRT85P78386 507 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 MC2RQ01718 297 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 ITKQ08881 620 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 TMPRSS9Q7Z410 1059 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 PEG10Q86TG7 708 aaKnown RBP5.61□□□□□ -1.51
VRK1-207ENST00000557352 ADGRG5Q8IZF4 528 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 PDPRQ8NCN5 879 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 SLC17A8Q8NDX2 589 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 TFAP2BQ92481 460 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 FBXL20Q96IG2 436 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 UROC1Q96N76 676 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 ARPP21Q9UBL0 812 aaPredicted RBP5.61□□□□□ -1.51
VRK1-207ENST00000557352 SERPINB13Q9UIV8 391 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 MRFAP1Q9Y605 127 aa5.61□□□□□ -1.51
VRK1-207ENST00000557352 CCDC151A5D8V7 595 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 TOR1BO14657 336 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 GABRDO14764 452 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 GRIA3P42263 894 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
VRK1-207ENST00000557352 POU6F2P78424 691 aaPredicted RBP5.6□□□□□ -1.51
VRK1-207ENST00000557352 PIGFQ07326 219 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 PTPRRQ15256 657 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 NBPF8Q3BBV2 869 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 AKNAD1Q5T1N1 836 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 GRASPQ7Z6J2 395 aaPredicted RBP5.6□□□□□ -1.51
VRK1-207ENST00000557352 TOR1AIP2Q8NFQ8 470 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 NSUN6Q8TEA1 469 aaKnown RBP5.6□□□□□ -1.51
VRK1-207ENST00000557352 TIMP4Q99727 224 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 ENTPD2Q9Y5L3 495 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 KAT6AQ92794 2004 aa5.6□□□□□ -1.51
VRK1-207ENST00000557352 SBNO2Q9Y2G9 1366 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 E9PLN8 166 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 ORC4O43929 436 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 KATNA1O75449 491 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 ANXA1P04083 346 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 RPLP2P05387 115 aaKnown RBP5.59□□□□□ -1.51
VRK1-207ENST00000557352 ELFN1P0C7U0 828 aa5.59□□□□□ -1.51
VRK1-207ENST00000557352 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms