RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 LRRC7Q96NW7 1537 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 OPHN1O60890 802 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 BMP10O95393 424 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 THPOP40225 353 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 PRCPP42785 496 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 NFIAQ12857 509 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 NOGQ13253 232 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 IL31Q6EBC2 164 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 KRT80Q6KB66 452 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 RBBP8NLQ8NC74 664 aaPredicted RBP12.56□□□□□ -0.4
NEK9-210ENST00000557026 DACT3Q96B18 629 aaPredicted RBP12.56□□□□□ -0.4
NEK9-210ENST00000557026 KRT82Q9NSB4 513 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 ZFATQ9P243 1243 aa12.56□□□□□ -0.4
NEK9-210ENST00000557026 CCDC78A2IDD5 438 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 F5H5T6 163 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 NCAM2O15394 837 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 GYS1P13807 737 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 RAG1P15918 1043 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 PCNX4Q63HM2 1172 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 RIBC1Q8N443 379 aaPredicted RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 TMC2Q8TDI7 906 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 ATG4CQ96DT6 458 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 UROC1Q96N76 676 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 CNPY3Q9BT09 278 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 XAB2Q9HCS7 855 aaKnown RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 CLCA2Q9UQC9 943 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 DFFAO00273 331 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 GPD1P21695 349 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 PDAP1Q13442 181 aaKnown RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 XPO6Q96QU8 1125 aaKnown RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 CAPN11Q9UMQ6 739 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 C5orf58C9J3I9 102 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.4
NEK9-210ENST00000557026 FGF19O95750 216 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 IL1R1P14778 569 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 SPRP35270 261 aaPredicted RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 FMO5P49326 533 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 EIF3EP60228 445 aaKnown RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 CDH18Q13634 790 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 MPZL3Q6UWV2 235 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 METTL3Q86U44 580 aaKnown RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 FAM196BA6NMK8 535 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 ZNF839A8K0R7 811 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
NEK9-210ENST00000557026 CTSHP09668 335 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 SRGNP10124 158 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 LCP1P13796 627 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 TYK2P29597 1187 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 DDX42Q86XP3 938 aaKnown RBP eCLIP12.55□□□□□ -0.4
NEK9-210ENST00000557026 ZDHHC17Q8IUH5 632 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 APBB2Q92870 758 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
NEK9-210ENST00000557026 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 A0A1W2PQJ5 194 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 UBA6A0AVT1 1052 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 ALDH2P05091 517 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 OCM2P0CE71 109 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 OCMP0CE72 109 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 NCF2P19878 526 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 DNAJB2P25686 324 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 MAPK1P28482 360 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 TCF7P36402 384 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 FNTAP49354 379 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 PDIA6Q15084 440 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 PKN3Q6P5Z2 889 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 CCDC149Q6ZUS6 474 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 TRMT10CQ7L0Y3 403 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 CCDC126Q96EE4 140 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 SAAL1Q96ER3 474 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 HPDLQ96IR7 371 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 VPS11Q9H270 941 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 KRCC1Q9NPI7 259 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 PKD2L2Q9NZM6 624 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 SYNCRIPO60506 623 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 MCF2P10911 925 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 ITIH2P19823 946 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 GCKP35557 465 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 CAPRIN1Q14444 709 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 PDK2Q15119 407 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 PTPROQ16827 1216 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 PABPC1LQ4VXU2 614 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 FAM43BQ6ZT52 329 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 FMR1NBQ8N0W7 255 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 CASS4Q9NQ75 786 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 MPP6Q9NZW5 540 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 STK38LQ9Y2H1 464 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 AAR2Q9Y312 384 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 FAM107AO95990 144 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 TUFMP49411 452 aaKnown RBP12.54□□□□□ -0.4
NEK9-210ENST00000557026 IL1RL1Q01638 556 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 COG4Q9H9E3 785 aa12.54□□□□□ -0.4
NEK9-210ENST00000557026 PRDM10Q9NQV6 1147 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms