RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TSHZ3Q63HK5 1081 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 LMBRD2Q68DH5 695 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 SYT13Q7L8C5 426 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 TBC1D10CQ8IV04 446 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 PLEKHM2Q8IWE5 1019 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 ZSCAN18Q8TBC5 510 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 PIBF1Q8WXW3 757 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 ACDQ96AP0 544 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF512Q96ME7 567 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 HHIPQ96QV1 700 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 GAD1Q99259 594 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 FDXACB1Q9BRP7 624 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 KRT23Q9C075 422 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 SLITRK6Q9H5Y7 841 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 TBC1D22BQ9NU19 505 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 THG1LQ9NWX6 298 aaKnown RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 IL17BQ9UHF5 180 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 FKBPLQ9UIM3 349 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 DNMT3LQ9UJW3 386 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 PCDHA10Q9Y5I2 948 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 FNDC1Q4ZHG4 1894 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-245ENST00000556958 TTC41PQ6P2S7 1318 aa6.42□□□□□ -1.38
ATXN3-245ENST00000556958 KIAA1217Q5T5P2 1943 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 ARHGEF37A1IGU5 675 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 DDX39AO00148 427 aaKnown RBP6.41□□□□□ -1.38
ATXN3-245ENST00000556958 IPO5O00410 1097 aaKnown RBP6.41□□□□□ -1.38
ATXN3-245ENST00000556958 MEIS1O00470 390 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 PRRG1O14668 218 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 CYTH3O43739 400 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 SLC28A2O43868 658 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 SH3BP5O60239 455 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 PROCP04070 461 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 SYPP08247 313 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 C6P13671 934 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 CD59P13987 128 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 ITPKBP27987 946 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 CCR10P46092 362 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 SCNN1GP51170 649 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 RHDQ02161 417 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 BYSLQ13895 437 aaKnown RBP6.41□□□□□ -1.38
ATXN3-245ENST00000556958 HSP90AA2PQ14568 343 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-245ENST00000556958 GRM4Q14833 912 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 ITPRIPL2Q3MIP1 535 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 TMEM196Q5HYL7 178 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 PKN3Q6P5Z2 889 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 GLRX5Q86SX6 157 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 TICAM2Q86XR7 235 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 TEX2Q8IWB9 1127 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-245ENST00000556958 TTC8Q8TAM2 541 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 BAP1Q92560 729 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 TCEAL4Q96EI5 215 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 ZSWIM3Q96MP5 696 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 AGPAT5Q9NUQ2 364 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 DNAAF2Q9NVR5 837 aaKnown RBP6.41□□□□□ -1.38
ATXN3-245ENST00000556958 GABBR1Q9UBS5 961 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 INVSQ9Y283 1065 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 GIT1Q9Y2X7 761 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 NEDD4P46934 1319 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 PATJQ8NI35 1801 aa6.41□□□□□ -1.38
ATXN3-245ENST00000556958 F8W810 466 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 TRDMT1O14717 391 aaKnown RBP6.4□□□□□ -1.38
ATXN3-245ENST00000556958 ADAM12O43184 909 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 FOSP01100 380 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SERPINF2P08697 491 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 GP1BBP13224 206 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 HLA-EP13747 358 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 DRD1P21728 446 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SMARCA1P28370 1054 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 MLH1P40692 756 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 EIF2S3P41091 472 aaKnown RBP6.4□□□□□ -1.38
ATXN3-245ENST00000556958 IL12RB1P42701 662 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 RIPPLY3P57055 190 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 VAC14Q08AM6 782 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SERINC3Q13530 473 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 DMC1Q14565 340 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SLC35G1Q2M3R5 365 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 LYSMD4Q5XG99 296 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 NIPA1Q7RTP0 329 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SRGAP1Q7Z6B7 1085 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 RHPN2Q8IUC4 686 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 MINDY1Q8N5J2 469 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 ARMC2Q8NEN0 867 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 TSTD1Q8NFU3 115 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 ZNF461Q8TAF7 563 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 NANOS1Q8WY41 292 aaKnown RBP6.4□□□□□ -1.38
ATXN3-245ENST00000556958 JPH2Q9BR39 696 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-245ENST00000556958 ZFAND3Q9H8U3 227 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 MIOSQ9NXC5 875 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 OBP2AQ9NY56 170 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 GTSE1Q9NYZ3 720 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SUCLA2Q9P2R7 463 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-245ENST00000556958 SAMM50Q9Y512 469 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 BACE2Q9Y5Z0 518 aa6.4□□□□□ -1.38
ATXN3-245ENST00000556958 MIA3Q5JRA6 1907 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms