RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ATF7P17544 494 aaPredicted RBP25.47■■□□□ 1.67
SIX4-203ENST00000556952 AGMOQ6ZNB7 445 aa25.47■■□□□ 1.67
SIX4-203ENST00000556952 FAM71AQ8IYT1 594 aa25.47■■□□□ 1.67
SIX4-203ENST00000556952 CCDC42Q96M95 316 aa25.47■■□□□ 1.67
SIX4-203ENST00000556952 SLC38A7Q9NVC3 462 aa25.47■■□□□ 1.67
SIX4-203ENST00000556952 TUBGCP4Q9UGJ1 667 aa25.47■■□□□ 1.67
SIX4-203ENST00000556952 C9IYK1 514 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 EOMESO95936 686 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 ANXA13P27216 316 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 MLH1P40692 756 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 ARID5AQ03989 594 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 MTF1Q14872 753 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 ZNF598Q86UK7 904 aaKnown RBP25.46■■□□□ 1.67
SIX4-203ENST00000556952 LINC01599Q8WXQ3 324 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 DEF6Q9H4E7 631 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 RSAD1Q9HA92 442 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 AGAP1Q9UPQ3 857 aa25.46■■□□□ 1.67
SIX4-203ENST00000556952 EPN1Q9Y6I3 576 aaPredicted RBP25.46■■□□□ 1.67
SIX4-203ENST00000556952 ZBBXA8MT70 800 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 PTGESO14684 152 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 CCP110O43303 1012 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 NDUFA10O95299 355 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 PNMA6AP0CW24 399 aaPredicted RBP25.45■■□□□ 1.66
SIX4-203ENST00000556952 ZNF667Q5HYK9 610 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 HABP4Q5JVS0 413 aaKnown RBP25.45■■□□□ 1.66
SIX4-203ENST00000556952 SCARA3Q6AZY7 606 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 LRRC52Q8N7C0 313 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 LPPQ93052 612 aa25.45■■□□□ 1.66
SIX4-203ENST00000556952 C18orf25Q96B23 403 aaPredicted RBP25.45■■□□□ 1.66
SIX4-203ENST00000556952 PPP1R10Q96QC0 940 aaKnown RBP25.45■■□□□ 1.66
SIX4-203ENST00000556952 ARL5CA6NH57 179 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 MEIS3P2A8K0S8 358 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 PLEKP08567 350 aaPredicted RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 P4HA1P13674 534 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 EIF4A3P38919 411 aaKnown RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 GUCY2FP51841 1108 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 FAM189BP81408 668 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 MYO1EQ12965 1108 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 TOGARAM2Q6ZUX3 1019 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 RTN4RL1Q86UN2 441 aaPredicted RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 ELMO3Q96BJ8 720 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 HPDLQ96IR7 371 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 ZFP42Q96MM3 310 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 GAD1Q99259 594 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 HAUS4Q9H6D7 363 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 EIF3CLB5ME19 914 aaKnown RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 YWHAEP62258 255 aaKnown RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 FAM109BQ6ICB4 259 aaPredicted RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 GSTCDQ8NEC7 633 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 EIF3CQ99613 913 aaKnown RBP25.44■■□□□ 1.66
SIX4-203ENST00000556952 ARID3AQ99856 593 aa25.44■■□□□ 1.66
SIX4-203ENST00000556952 ANO9A1A5B4 782 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 INPPL1O15357 1258 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 ZSCAN12O43309 604 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 BAIAP3O94812 1187 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 IPO7O95373 1038 aaKnown RBP25.43■■□□□ 1.66
SIX4-203ENST00000556952 THP07101 528 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 CCDC175P0C221 793 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 ASPAP45381 313 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 KIF11P52732 1056 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 ASTE1Q2TB18 679 aaPredicted RBP25.43■■□□□ 1.66
SIX4-203ENST00000556952 C9orf57Q5W0N0 161 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 VPS36Q86VN1 386 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 GPIHBP1Q8IV16 184 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 RNF169Q8NCN4 708 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 ZNF560Q96MR9 790 aa25.43■■□□□ 1.66
SIX4-203ENST00000556952 FAM124BQ9H5Z6 455 aaPredicted RBP25.43■■□□□ 1.66
SIX4-203ENST00000556952 SCN1AP35498 2009 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 AKR1B10O60218 316 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 ACO1P21399 889 aaKnown RBP25.42■■□□□ 1.66
SIX4-203ENST00000556952 LRPAP1P30533 357 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 PNPLA4P41247 253 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 WDR5P61964 334 aaKnown RBP25.42■■□□□ 1.66
SIX4-203ENST00000556952 PTK2Q05397 1052 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 IKBKEQ14164 716 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 WDR72Q3MJ13 1102 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 CCAR2Q8N163 923 aaKnown RBP25.42■■□□□ 1.66
SIX4-203ENST00000556952 BCO2Q9BYV7 579 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 ELAC1Q9H777 363 aaKnown RBP25.42■■□□□ 1.66
SIX4-203ENST00000556952 CNTN6Q9UQ52 1028 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 PPP2R2CQ9Y2T4 447 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 ADGRG1Q9Y653 693 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 SZT2Q5T011 3432 aa25.42■■□□□ 1.66
SIX4-203ENST00000556952 SOX1O00570 391 aaPredicted RBP25.41■■□□□ 1.66
SIX4-203ENST00000556952 PIRO00625 290 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 ZNF500O60304 480 aaPredicted RBP25.41■■□□□ 1.66
SIX4-203ENST00000556952 OFD1O75665 1012 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 LCA5LO95447 670 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 USP8P40818 1118 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 KRT83P78385 493 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 DEFB103AP81534 67 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 LRIT3Q3SXY7 679 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 UBR7Q8N806 425 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 MTIF3Q9H2K0 278 aaKnown RBP25.41■■□□□ 1.66
SIX4-203ENST00000556952 TMEM161AQ9NX61 479 aa25.41■■□□□ 1.66
SIX4-203ENST00000556952 ABHD14A-ACY1A0A1B0GW23 586 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 GRXCR1A8MXD5 290 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 KRT5P13647 590 aa25.4■■□□□ 1.66
SIX4-203ENST00000556952 SOX4Q06945 474 aaPredicted RBP25.4■■□□□ 1.66
SIX4-203ENST00000556952 GRIK3Q13003 919 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms