RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 MRPS17Q9Y2R5 130 aaKnown RBP16.11■□□□□ 0.17
CHD8-211ENST00000556833 STK24Q9Y6E0 443 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 PIAS3Q9Y6X2 628 aa16.11■□□□□ 0.17
CHD8-211ENST00000556833 A0A1W2PRU2 124 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 SPTLC1O15269 473 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 NCAM2O15394 837 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 CLDN3O15551 220 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 PLA2G4BP0C869 781 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 GUCY2CP25092 1073 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 SOX9P48436 509 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 YWHAHQ04917 246 aaPredicted RBP16.1■□□□□ 0.17
CHD8-211ENST00000556833 ZNF528Q3MIS6 628 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 TPGS2Q68CL5 300 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 DSTYKQ6XUX3 929 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 FAM3CQ92520 227 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 DNASE1L2Q92874 299 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 SMARCD2Q92925 531 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 RSPRY1Q96DX4 576 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 TMEM209Q96SK2 561 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 ZNF334Q9HCZ1 680 aaPredicted RBP16.1■□□□□ 0.17
CHD8-211ENST00000556833 SLC27A5Q9Y2P5 690 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 PCDHGA2Q9Y5H1 932 aa16.1■□□□□ 0.17
CHD8-211ENST00000556833 SCN1AP35498 2009 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 SLC38A8A6NNN8 435 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 HEPACAM2A8MVW5 462 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 PSMC3P17980 439 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 CCNE1P24864 410 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 SMTNP53814 917 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 PPP2R3AQ06190 1150 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 MCL1Q07820 350 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 DUSP4Q13115 394 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 PUM1Q14671 1186 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHD8-211ENST00000556833 USP37Q86T82 979 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 ZHX3Q9H4I2 956 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 LMAN1LQ9HAT1 526 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 PRMT8Q9NR22 394 aaPredicted RBP16.09■□□□□ 0.17
CHD8-211ENST00000556833 RBM12Q9NTZ6 932 aaKnown RBP16.09■□□□□ 0.17
CHD8-211ENST00000556833 RALGAPA1Q6GYQ0 2036 aa16.09■□□□□ 0.17
CHD8-211ENST00000556833 NUP210Q8TEM1 1887 aaPredicted RBP16.08■□□□□ 0.17
CHD8-211ENST00000556833 ATG2BQ96BY7 2078 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 K7ENM7 598 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 LAD1O00515 517 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 ZNF263O14978 683 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 HOXC13P31276 330 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 PRPHP41219 470 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 MAGEA9P43362 315 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 RPS9P46781 194 aaKnown RBP16.08■□□□□ 0.16
CHD8-211ENST00000556833 LIG4P49917 911 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 ATP2C1P98194 919 aaPredicted RBP16.08■□□□□ 0.16
CHD8-211ENST00000556833 ARSHQ5FYA8 562 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 PRR23BQ6ZRT6 265 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 MAP4K3Q8IVH8 894 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 SYT2Q8N9I0 419 aaPredicted RBP16.08■□□□□ 0.16
CHD8-211ENST00000556833 ATAD1Q8NBU5 361 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 ZBTB44Q8NCP5 570 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 LRRC15Q8TF66 581 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 SPIRE2Q8WWL2 714 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 IRF7Q92985 503 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 ZFYVE19Q96K21 471 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 NELL2Q99435 816 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 DNAJC25Q9H1X3 360 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 C17orf75Q9HAS0 396 aa16.08■□□□□ 0.16
CHD8-211ENST00000556833 ZNF638Q14966 1978 aaKnown RBP16.07■□□□□ 0.16
CHD8-211ENST00000556833 TTC26A0AVF1 554 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 HNRNPDLO14979 420 aaKnown RBP16.07■□□□□ 0.16
CHD8-211ENST00000556833 CLTAP09496 248 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 SATB1Q01826 763 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 DMWDQ09019 674 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 SRSF5Q13243 272 aaKnown RBP16.07■□□□□ 0.16
CHD8-211ENST00000556833 ENOX2Q16206 610 aaKnown RBP16.07■□□□□ 0.16
CHD8-211ENST00000556833 HEATR6Q6AI08 1181 aaKnown RBP16.07■□□□□ 0.16
CHD8-211ENST00000556833 HAUS6Q7Z4H7 955 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 GPBP1Q86WP2 473 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 TMC8Q8IU68 726 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 YAF2Q8IY57 180 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 ZNF687Q8N1G0 1237 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 TIPINQ9BVW5 301 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 EPC1Q9H2F5 836 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 CHRDQ9H2X0 955 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 PARD6AQ9NPB6 346 aa16.07■□□□□ 0.16
CHD8-211ENST00000556833 TISP43B9A030 160 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 M0QZQ0 153 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 MAN2B1O00754 1011 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 LILRB5O75023 590 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 NFICP08651 508 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 KPNA1P52294 538 aaPredicted RBP16.06■□□□□ 0.16
CHD8-211ENST00000556833 EPHB3P54753 998 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 SPEM2Q0P670 501 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 TMEM119Q4V9L6 283 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 HYIQ5T013 277 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 OVOS1Q6IE37 1185 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 JADE1Q6IE81 842 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 ZPBP2Q6X784 338 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 Q6ZS52 159 aa16.06■□□□□ 0.16
CHD8-211ENST00000556833 MYCT1Q8N699 235 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms